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Boyce Thompson Institute - Advancing Research and Education In Plant Science |Boyce Thompson Institute
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http://bti.cornell.edu/
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Boyce Thompson Institute - Advancing Research and Education In Plant Science | | bti.cornell.edu Reviews
https://bti.cornell.edu
Boyce Thompson Institute
Fei Bioinformatics Lab
Development of online databases to facilitate data distribution, analysis, mining and integration. Tomato Functional Genomics Database. Pan-African Sweet Potato Virome. Development of computational tools for omics data analysis. A web-based tool for comprehensive mining and integration of gene expression and metabolite changes in the context of biochemical pathways. Assembly package for transcriptome sequences generated using 454 or Sanger platforms. Inferring gene regulatory networks. Living cells are t...
Tomato Functional Genomics Database (TFGD)
Processed RNA-seq datasets with expression information (RPKM). Of tomato microarray experiments following MIAME guidelines. Blast against probe sequences. GO term enrichment analysis. Array data analysis tools. Identify enriched GO terms. Download analyzed array results. Correlation of metabolite and gene expression profiles. Order cDNA, BAC or fosmid clones. Order TOM2 oligo arrays. Order BAC library filters.
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Boyce Thompson Institute - Georg Jander |
http://bti.cornell.edu/staff/jander-georg
1){ location.href =' ; }" class="single single-aw staff postid-174 ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Phone: (office) 607 254 1365; (lab) 607 216 8129. Graduate fields: Plant Biology; Entomology. The Jander lab studies the ...
Boyce Thompson Institute - Eric Richards |
http://bti.cornell.edu/staff/dr-eric-richards
1){ location.href =' ; }" class="single single-aw staff postid-427 ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Professor, Vice President for Research. Phone: (office) 607 254 4676; (lab). Chromatin DNA Methylation Interface. The sec...
Boyce Thompson Institute - Jim Giovannoni |
http://bti.cornell.edu/staff/dr-jim
1){ location.href =' ; }" class="single single-aw staff postid-414 ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Professor / USDA Scientist. Phone: (office) 607 254 1414; (lab) 607 254 1259. We employ several experimental systems but ...
Boyce Thompson Institute - Zhangjun Fei |
http://bti.cornell.edu/staff/fei-zhangjun
1){ location.href =' ; }" class="single single-aw staff postid-412 ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Phone: (office) (607) 254-3234; (lab). Unraveling the complexity of fleshy fruit transcriptomes. Lab: 607 254 2334. 2010 ...
Boyce Thompson Institute - Joyce Van Eck |
http://bti.cornell.edu/staff/dr-joyce-van-eck
1){ location.href =' ; }" class="single single-aw staff postid-431 ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Patents & Licensing. Collaborations & Consulting. Phone: (office) (607) 254-1686; (lab) 607-254-1207. Center for Plant Biotechnology Research. J Exp Botany 2008. Brooks, C...
TOTAL PAGES IN THIS WEBSITE
18
SMID-DB
http://www.smid-db.org/download
The SMID DB batch file and structure files can be obtained by emailing smid-db@cornell.edu. Or by using the links below. Metabolite structure files can be downloaded individually from GitHub. The batch file containing all SMID entries can be downloaded here. By right clicking and selecting "Save Link As.".
Mt3.5-based Downloads
http://mtweb1.cfans.umn.edu/downloads/mt35
M truncatula de novo. Detailed description of the data files is available from the readme. File All files listed below are based on Mt3.5 reference genome and Mt3.5v4 annotation. The latter is provided for your convenience. Please note that Mt3.5v4 is not the latest version of the annotation. The latest versions of the reference genome and annotation can be downloaded from JCVI's FTP site. If you would like to obtain M. truncatula. Hapmap data that is not listed below. Mt35v4 chr1-8 TEs.gff.gz. Mt35 outg...
Publications
http://mtweb1.cfans.umn.edu/resources/publications
M truncatula de novo. Peng Zhou, Kevin AT Silverstein, Liangliang Gao, Jonathan D Walton, Sumitha Nallu, Joseph Guhlin and Nevin D Young. Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application). Paape T, Bataillon T, Zhou P, Kono T, Briskine R, Young ND, Tiffin P. Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula. 22: 3525-3538 doi: 10.1111/mec.12329. 8(5): e65688. doi:10.1371/journal.pone.0065688. Epstein B, Branca A,...
Mt4.0-based Downloads
http://mtweb1.cfans.umn.edu/downloads/mt40
M truncatula de novo. Detailed description of the data files is available from the readme. File (updated 22 April 2014). All files listed below are based on Mt4.0v1 reference genome and Mt4.0v1 annotation. Both are available from JCVI's Medicago truncatula download page. A comparison of a small region was also performed and is also available for download. If you would like to obtain M. truncatula. Hapmap data that is not listed below. SNPs for the GWAS accessions (262) by chromosome. Primary Collaborator...
Germplasm
http://mtweb1.cfans.umn.edu/hapmap/germplasm
M truncatula de novo. To request germplasm, please choose the accessions below then click the Request button. CADL (HM102), Tunisian lines (HM210-HM245), and Damas lines (HM280-HM286) are not. Available through this website. Please contact us. Some Medicago germplasm requests in 2014 may have been forwarded to an incorrect email address for Jean-Marie Prosperi at INRA-Montpellier. The correct email address for Dr. Prosperi is: jean-marie.prosperi@supagro.inra.fr. Doug Cook, UC Davis. Charlie Brummer, UGA.
SMID-DB
http://www.smid-db.org/about
SMIDs: Unique identifiers for biogenic small molecules in C. elegans. Biogenic small molecules/secondary metabolites are referred to by a plethora of names and abbreviations. Some compounds are referred to by more than 10 different names, and in certain cases different compounds are referred to by the same name. Significantly, there is no established system for naming newly identified metabolites that would permit database searching for small molecule metabolites in the same manner as for genes. Ambiguit...
Sol Genomics Network
http://solgenomics.wur.nl/organism/Solanum_pimpinellifolium/genome
Clone(s) in cart ( order. Old browser version detected. This site is optimized for modern web browsers. Please upgrade your browser. Some features may not work in outdated browsers. Tomato FPC contig map. 150 Tomato Genome Resequencing Project. BGI Tomato 360 genomes. International Tomato Sequencing Project. US tomato sequencing project. Tomato Expression Database (TED). Clones, Arrays, Unigenes and BACs. Is the wild tomato that is most closely related to the domesticated Solanum lycopersicum.
Sol Genomics Network
http://solgenomics.wur.nl/cview/index.pl
Clone(s) in cart ( order. Old browser version detected. This site is optimized for modern web browsers. Please upgrade your browser. Some features may not work in outdated browsers. Tomato FPC contig map. 150 Tomato Genome Resequencing Project. BGI Tomato 360 genomes. International Tomato Sequencing Project. US tomato sequencing project. Tomato Expression Database (TED). Clones, Arrays, Unigenes and BACs. Arabidopsis thaliana sequenced-based COSII map. Petunia exserta X P. parodii. Tomato-EXPIMP 2009: S&...
Sol Genomics Network
http://solgenomics.wur.nl/help/faq.pl
Clone(s) in cart ( order. Old browser version detected. This site is optimized for modern web browsers. Please upgrade your browser. Some features may not work in outdated browsers. Tomato FPC contig map. 150 Tomato Genome Resequencing Project. BGI Tomato 360 genomes. International Tomato Sequencing Project. US tomato sequencing project. Tomato Expression Database (TED). Clones, Arrays, Unigenes and BACs. SGN: Frequently Asked Questions (FAQ). If you have a question that you think should be added. With a...
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Termopane Gealan, tamplarie pvc Rehau, oferte termopane Veka, Deceuninck, tamplarie aluminiu Exalco, Alumil
TERMOPANE - Cerere de oferta. BTI Partener Prompt - Despre noi. Producator de TAMPLARIE PVC SI ALUMINIU CU GEAM TERMOPAN -. FERESTRE, USI, PERETI CORTINA. Societate cu capital integral privat - a luat fiinta si s-a dezvoltat folosind personal pregatit in cel mai vechi centru de prelucrare a aluminului din Romania, simbol al excelentei si traditiei in domeniu - SLATINA. TERMOPANE - Sisteme de usi si ferestre din profile de PVC si aluminiu. Ferestre PVC fixe si mobile. Cu deschidere simpla sau oscilobatanta.
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Boyce Thompson Institute - Advancing Research and Education In Plant Science |
1){ location.href =' ; }" class="home page page-id-21 page-template page-template-template-home page-template-template-home-php ". Dr Frank C. Schroeder. Dr Joyce Van Eck. Genomics & Systems. Facilities & Services. Apply for an Internship. Bioenergy & Bioproducts. Collaborations & Consulting. Genomics & Systems. Facilities & Services. Apply for an Internship. Bioenergy & Bioproducts. Collaborations & Consulting. BTI 2014 Annual Report online now. BTI teachers ‘emerge’. Spray paint explains plant stress?
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