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Welcome | cegg.unige.ch Computational Evolutionary Genomics Group

Body Louse genome SI. HIV Transmission Clusters SI. Fri, 09/23/2011 - 08:54. We focus on comparative analyses of genome sequences to understand principles of molecular evolution and approach the fundamental questions of the origin and evolution of biological complexity. Through analysis of multiple species, we aim to quantify evolutionary processes that shape repertoires of functional genomic elements such as. Non-coding RNA genes (e.g. microRNAs), and. Conserved non-genic sequences (CNS). Species, only ...

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Welcome | cegg.unige.ch Computational Evolutionary Genomics Group | cegg.unige.ch Reviews

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Body Louse genome SI. HIV Transmission Clusters SI. Fri, 09/23/2011 - 08:54. We focus on comparative analyses of genome sequences to understand principles of molecular evolution and approach the fundamental questions of the origin and evolution of biological complexity. Through analysis of multiple species, we aim to quantify evolutionary processes that shape repertoires of functional genomic elements such as. Non-coding RNA genes (e.g. microRNAs), and. Conserved non-genic sequences (CNS). Species, only ...

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Welcome | cegg.unige.ch Computational Evolutionary Genomics Group | cegg.unige.ch Reviews

https://cegg.unige.ch

Body Louse genome SI. HIV Transmission Clusters SI. Fri, 09/23/2011 - 08:54. We focus on comparative analyses of genome sequences to understand principles of molecular evolution and approach the fundamental questions of the origin and evolution of biological complexity. Through analysis of multiple species, we aim to quantify evolutionary processes that shape repertoires of functional genomic elements such as. Non-coding RNA genes (e.g. microRNAs), and. Conserved non-genic sequences (CNS). Species, only ...

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cegg.unige.ch

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Navigation | cegg.unige.ch Computational Evolutionary Genomics Group

http://cegg.unige.ch/publications

Body Louse genome SI. HIV Transmission Clusters SI. Here you will find an archive of publications published by our group members. Evolution of sexual traits influencing vectorial capacity in anopheline mosquitoes. Mitchell SN, Kakani EG, South A, Howell PI, Waterhouse RM. View in separate page. A Massive Expansion of Effector Genes Underlies Gall-Formation in the Wheat Pest Mayetiola destructor. Zhao C, Escalante LN, Chen H, Benatti TR, Qu J, Chellapilla S, Waterhouse RM. View in separate page. Phylogene...

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Navigation | cegg.unige.ch Computational Evolutionary Genomics Group

http://cegg.unige.ch/publications/author/Kriventseva

Body Louse genome SI. HIV Transmission Clusters SI. OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software. Tegenfeldt F, Petty TJ. Simão FA, Pozdnyakov IA, Ioannidis P, Zdobnov EM. View in separate page. Social insect genomes: dramatic evolution in gene composition and regulation, preserving regulatory features linked to sociality. Simola DF, Wissler L, Donahue G, Waterhouse RM. Berger SL, Gadau J. View in separate page. Tegenfeldt F, Li J. View in separate page.

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CEGG Research Projects | cegg.unige.ch Computational Evolutionary Genomics Group

http://cegg.unige.ch/projects

Body Louse genome SI. HIV Transmission Clusters SI. Fri, 10/07/2011 - 12:14. Arthropods are a highly successful group of animals that constitute more than 80% of all described living animal species. CEGG has contributed to the analyses of several arthropod genomes, and continues to be involved with new projects to analyse newly sequenced insects and other arthropods. Genome rearrangement events (such as inversion, translocation, fusion and fission), which shape genome architectures over millions of years...

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Navigation | cegg.unige.ch Computational Evolutionary Genomics Group

http://cegg.unige.ch/publications/author/Gerlach

Body Louse genome SI. HIV Transmission Clusters SI. Identification of Site-Specific Adaptations Conferring Increased Neural Cell Tropism during Human Enterovirus 71 Infection. Cordey S, Petty TJ. Schibler M, Martinez Y, Gerlach D. Van Belle S, Turin L, Zdobnov EM. Kaiser L, Tapparel C. View in separate page. The ecoresponsive genome of Daphnia pulex. Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV. Grigoriev IV, Lynch M, Boore JL. View in separate page. View in separate page. Cordey S, Junier T. View i...

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ImmunoDB | cegg.unige.ch Computational Evolutionary Genomics Group

http://cegg.unige.ch/Insecta/immunodb

Body Louse genome SI. HIV Transmission Clusters SI. Wed, 01/02/2008 - 15:57. Insect Immune-Related Genes and Gene Families. A simple access point to view gene family assignments, annotations and phylogenetic data. To access the archived version of the ImmunoDB resource released with the publication, Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes , Science, 2007, please click here. View expert annotations for D. melanogaster. CLIPs: Clip-Domain Serine Proteases.

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biadb.unige.ch

Laboratoires | Master en Biologie orientation “Bioinformatique et analyse des données en biologie”

http://biadb.unige.ch/fr/laboratoires

Master en Biologie orientation Bioinformatique et analyse des données en biologie. Laboratoire d’anthropologie, génétique et peuplements (. Laboratoire d’évolution artificielle et naturelle (. Centre universitaire de bioinformatique (. Groupe Protéomique Informatique (. Groupe Parallélisme et Calcul Scientifique (. Computational Evolutionary Genomics (. De plus, plusieurs laboratoires de biologie accueillent des étudiant-e-s en co-direction avec le Laboratoire d’anthropologie, génétique et peuplements (.

kafatos.openwetware.org

Kafatos: collaborators

http://kafatos.openwetware.org/collaborators.html

Click here to visit our NEW WEBSITE. The content below is most likely out of date. We also have a new lean and mean openwetware area. The Computational Evolutionary Genomics Group, University of Geneva Medical School. Of Dr O.Billker. Johns Hopkins University, Baltimore, MD.

busco.ezlab.org

BUSCO v1

http://busco.ezlab.org/v1

Assessing genome assembly and annotation completeness with B. 8= High-throughput genomics has revolutionized biological research, however, while the number of sequenced genomes grows by the day, quality assessment of the resulting assembled sequences remains complicated and mostly limited to technical measures like N50. BUSCO assessments offer intuitive metrics, based on evolutionarily informed expectations of gene content from hundreds of species, to gauge completeness of rapidly accumulating genomic da...

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cegg.unige.ch

Welcome | cegg.unige.ch Computational Evolutionary Genomics Group

Body Louse genome SI. HIV Transmission Clusters SI. Fri, 09/23/2011 - 08:54. We focus on comparative analyses of genome sequences to understand principles of molecular evolution and approach the fundamental questions of the origin and evolution of biological complexity. Through analysis of multiple species, we aim to quantify evolutionary processes that shape repertoires of functional genomic elements such as. Non-coding RNA genes (e.g. microRNAs), and. Conserved non-genic sequences (CNS). Species, only ...

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