elm.eu.org

ELM - Search the ELM resource

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. Showing a peptide from ELM class DOC USP7 MATH 1. A new ELM class has been annotated:. LIG 14-3-3 ChREBP 3. A new ELM class has been annotated:. LIG IRF3 LxIS 1. New instances added for. LIG Vh1 VBS 1. New instances have been added for. DEG SCF TRCP1 1. LIG LRP6 Inhibitor 1. We have added new instances for:. LIG APCC ABBA 1. LIG APCC ABBAyCdc20 2. DOC MAPK HePTP 8. DOC MAPK MEF2A 6. DOC MAPK DCC 7. MOD CDK 1 is now:. MOD CDK SPxK 1.

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ELM - Search the ELM resource | elm.eu.org Reviews

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The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. Showing a peptide from ELM class DOC USP7 MATH 1. A new ELM class has been annotated:. LIG 14-3-3 ChREBP 3. A new ELM class has been annotated:. LIG IRF3 LxIS 1. New instances added for. LIG Vh1 VBS 1. New instances have been added for. DEG SCF TRCP1 1. LIG LRP6 Inhibitor 1. We have added new instances for:. LIG APCC ABBA 1. LIG APCC ABBAyCdc20 2. DOC MAPK HePTP 8. DOC MAPK MEF2A 6. DOC MAPK DCC 7. MOD CDK 1 is now:. MOD CDK SPxK 1.

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1 elm home

2 elm prediction

3 elm db

4 elm classes

5 elm instances

6 elm pdb structures

7 elm binding domains

8 elm switches

9 elm pathways

10 elm references

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ELM - Search the ELM resource | elm.eu.org Reviews

https://elm.eu.org

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. Showing a peptide from ELM class DOC USP7 MATH 1. A new ELM class has been annotated:. LIG 14-3-3 ChREBP 3. A new ELM class has been annotated:. LIG IRF3 LxIS 1. New instances added for. LIG Vh1 VBS 1. New instances have been added for. DEG SCF TRCP1 1. LIG LRP6 Inhibitor 1. We have added new instances for:. LIG APCC ABBA 1. LIG APCC ABBAyCdc20 2. DOC MAPK HePTP 8. DOC MAPK MEF2A 6. DOC MAPK DCC 7. MOD CDK 1 is now:. MOD CDK SPxK 1.

SUBDOMAINS

phospho.elm.eu.org

Phospho.ELM Result

A database of S/T/Y phosphorylation sites. For phosphorylation sites in proteins using protein name or gene name. By selected kinase ( List. By selected phospho-peptide binding domain ( List. Choose which organisms to include. Do not show high throughput data. Output as Comma-Separated-Values (.csv). Phospho.ELM: a database of phosphorylation sites - update 2011". Dinkel H, Chica C, Via A, Gould CM, Jensen LJ, Gibson TJ, Diella F. Nucleic Acids Res. 2010 Nov 9. PMID: 21062810.

switches.elm.eu.org

switches.ELM

The switches.ELM resource, hosted by the ELM consortium. At the European Molecular Biology Laboratory (EMBL). Consists of a database that curates experimentally validated motif-based molecular switches and a prediction tool to identify possible switching mechanisms that might regulate a user-submitted motif of interest. This tool helps to extend knowledge and direct research on how motifs mediate cooperative decision-making in a context-dependent manner and direct reliable and robust cell regulation.

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elm.eu.org

1

ELM - Detail for LIG_SUMO_SIM_par_1

http://elm.eu.org/elms/elmPages/LIG_SUMO_SIM_par_1.html

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. X00AB;LIG SUMO SIM anti 2«. X00BB;LIG SxIP EBH 1». LIG SUMO SIM par 1. ELMs with same tags:. LIG SUMO SIM anti 2. MOD SUMO for 1. ELMs with same func. site:. LIG SUMO SIM anti 2. LIG SUMO SIM par 1. Support this theory: They both bind in parallel orientation and have a C-terminal acidic stretch. The crystal structure of RanBP2 (. DEST]{0,5}.[VILPTM][VIL][DESTVILMA][VIL].{0,1}[DEST]{1,10}. See 33 Instances for LIG SUMO SIM par 1.

2

ELM - Candidates

http://elm.eu.org/elms/candidates.html

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. ELM annotation process is a tedious and time-consuming process involving critical reading of primary and secondary literature, finding motif instances, generating multiple sequence alignments and more. In order not to loose track of possible annotations, we keep the following list of candidate motifs. We invite researchers to send us their feedback. Currently 331 candidates need annotation: (Add a new candidate). The eIF2α-binding mo...

3

ELM - Help

http://elm.eu.org/help.html

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. What methods are used for detecting functional sites? Currently, patterns written as regular expressions. Why are the ELM predictions not scored? Since a regular expression either matches or does not match a string (or a protein subsequence), in its nature the score would be 1 or 0. What does the ELM instance mapper do? Uses PHI-BLAST to map ELM predictions of a query sequence to known annotated ELM instances. The basis for the m...

4

ELM - Browse/Search instances

http://elm.eu.org/infos/viruses.html

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. Browse Viral ELM Instances. Export 239 instances as: tsv. Click table headers for sorting; Notes column:. Number of Switches,. Acc, Gene-, Name. CLV PCSK FUR 1. CLV PCSK FUR 1. CLV PCSK FUR 1. CLV PCSK FUR 1. CLV PCSK FUR 1. Epstein-Barr virus (strain B95-8). CLV PCSK FUR 1. Dengue virus 1 Br. CLV PCSK FUR 1. CLV PCSK FUR 1. CLV PCSK FUR 1. Ebola virus - May. CLV PCSK FUR 1. CLV PCSK FUR 1. Ebola virus - May. DEG APCC KENBOX 2. Epste...

5

ELM - Detail for LIG_CNOT1_NIM_1

http://elm.eu.org/elms/elmPages/LIG_CNOT1_NIM_1.html

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. X00AB;LIG Clathr ClatBox 2«. X00BB;LIG CORNRBOX». LIG CNOT1 NIM 1. The CNOT1-interacting motif (NIM) is present in the Nanos-1, -2 and -3 proteins and binds the C-terminal SH domain of CNOT1. The motif is present in. But seems to be missing in several animal lineages, including TAXON:7215, where Nanos was shown to bind the CNOT4 subunit (. FY][ P].[WFY][ P]DY.L. Not represented in taxons:. See 10 Instances for LIG CNOT1 NIM 1. CNOT1 ...

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bioinformatictools.blogspot.com

Bioinformatics Tools: In-silico characterization of proteins

http://bioinformatictools.blogspot.com/2011/11/in-silico-characterization-of-proteins.html

Bioinformatics has evolved as a great tool for molecular biologists. There are various tools available for helping in reducing the time required to analyze biological materials be it DNA, RNA, Proteins etc. I wish to list here few of the commonly used tools. Please send me suggestions to improve the content. If you like or dislike something, let me know, your inputs matters. contact me: drsanjivk[at]gmail[dot]com. Saturday, November 5, 2011. In-silico characterization of proteins. Different combinations ...

digtop.de

From Disease Genes to Protein Pathways :: DiGtoP

http://www.digtop.de/tools/links.php

PANTHER - Protein Analysis Through Evolutionary Relationships. HPRD - Human Protein Reference Database. HUPO - Human Proteome Organisation. PIR - Protein Information Ressource. PSI - Protein Structure Initiative. DIP - Database of Interacting Proteins. MIPS Protein-Protein Interaction Database. SCOPPI - Structural Classification of Protein-Protein Interfaces. STITCH - Chemical-Protein Interactions. Phospho.ELM - Curated Database of Phosphorylation Sites. ELM - Database of Regulatory Motifs.

syboss.eu

SyBoSS - Systems Biology of Stem Cells and Reprogramming: Our Partners

http://syboss.eu/partners.html

Go to the homepage. Skip to the navigation. Skip to the content. Skip to the sidebar. Go to the imprint. SyBoSS - Systems Biology of Stem Cells and Reprogramming. Supported by the EU Seventh Research Framework Programme (FP7). Recombineering is DNA engineering based on the use of homologous recombination in E. coli. The Stewart lab first showed that the phage proteins RecE/RecT and the Red operon of lambda phage are ideally suited for many DNA engineering tasks. To be updated soon. And eukaryotic cells (...

seemotif.csbb.ntu.edu.tw

seeMotif

http://seemotif.csbb.ntu.edu.tw/index.html

Exploring and visualizing sequence motifs in 3D structures. Given a set of motifs. And a reference sequence, seeMotif helps to visualize and exploring these motifs in appropriate structures selected based on a reference sequence. Below are some bookmarklets. Of seeMotif. They are useful when you want to see results from ELM. In seeMotif. Add them to your favorite/bookmark list, but do not click them directly. Here provides some examples to start using seeMotif:. Is the protein Subtilisin NAT of Bacillus.

tango.crg.es

Tango

http://tango.crg.es/links.jsp

A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. Links to related sites. An algorithm to predict the helical content of peptides. Fragmenting the protein space. Program for calculating the folding pathways of proteins and the effect of a point mutation on the protein stability. A Cell Network Simulation Program. Predicting amylogenic regions in protein sequences. Prediction of protein-protein interAction of moDular domAiNs. Molecular Phenotypes of Human Diseases.

3did.irbbarcelona.org

3did - Help

http://3did.irbbarcelona.org/help.php

The database of 3D Interaction Domains ( 3did. Is a collection of domain-domain interactions in proteins for which high-resolution three-dimensional structures are known. 3did. Those instances where the motif is significantly enriched in model species interactomes are included in 3did. To retrieve information on a domain, use the Domain query in the Search page. You can give the exact domain name, or just part of it. If no exact match is found, 3did. You can give the exact name of the motif, or just part...

seemotif.csbb.ntu.edu.tw

seeMotif

http://seemotif.csbb.ntu.edu.tw/tutorial_bookmarklet.html

Exploring and visualizing sequence motifs in 3D structures. A quick step-by-step of using seeMotif's bookmarklets. Right click on one of the bookmarklets, and choose Add to Favorites. If the browser warns the bookmarklet you are adding might not be safe, just click Yes to continue.). In the Add a Favorite. Dialog box, click Add. You can change the name of the bookmarklet. Here we suppose it is seeMotif@CSIE.NTU. Submit you query to supported servers, and keep the result page shown in your browser. A book...

openbsd.csie.nctu.edu.tw

OpenBSD at work

http://openbsd.csie.nctu.edu.tw/users.html

The term "users" has several connotations. Often want to meet other users of the system, to share ideas, problems and solutions, and discuss the system over a meal or a beer. One of the best ways to do this is with one of our User Groups worldwide. Another connotation of the term is "who is using the system, and for what? And that is the subject of the rest of this page. These companies. Find OpenBSD's security features hard to resist. Even governments. Established in 1986 and based in Sydney, HREOC is a...

lindinglab.science

Digital ‘Rosetta Stone’ Decrypts How Mutations Rewire Cancer Cells — Rune Linding : Research Group

http://www.lindinglab.science/news

Only in current section. Digital ‘Rosetta Stone’ Decrypts How Mutations Rewire Cancer Cells. Scientists have discovered how genetic cancer mutations systematically attack the networks controlling human cells, knowledge critical for the future development of personalized precision cancer treatments. Lori Waters, Waters Biomedical, 2015. Computational Rosetta Stone decodes Mutations Rewiring Cancer Signaling. Lead researcher on the projects, Prof Dr Rune Linding from the Biotech Research and Innovation Cen...

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elm.epcusd401.org

Home - SharpSchool Redirect

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elm.eru.rl.ac.uk

ERU Met Data

All in One Page. Energy Research Unit Meteorological Data. Met Data Summary for July 2016. 3/03/18: We have a new Wind Turbine. Our new wind turbine is in place, and generating electricity. The Britwind H15 was completed on 21st February, and commissioned on 22nd February. In its first 12 days, it generated 1046 KW. Measurements of wind speed and direction are made using instruments on a met tower (Twr 4) at 18m above ground level; while solar irradiance, atmospheric pressure, relative humidity, temperat...

elm.estinst.ee

Estonian Literary Magazine | Contents

No 30, spring 2010. No 29, autumn 2009. No 28, spring 2009. No 27, autumn 2008. No 26, spring 2008. No 25, autumn 2007. No 24, spring 2007. No 23, autumn 2006. No 22, spring 2006. No 21, autumn 2005. No 20, spring 2005. No 19, autumn 2004. No 18, spring 2004. No 17, autumn 2003. No 16, spring 2003. No 15, autumn 2002. No 14, spring 2002. No 13, autumn 2001. No 12, spring 2001. No 11, autumn 2000. No 10, spring 2000. No 9, autumn 1999. No 8, spring 1999.

elm.esu3.k12.ne.us

Elmwood-Murdock Public Schools

Our website has changed! Please update your bookmarks with the following URL: http:/ www.emknights.org. You should be redirected shortly. If not please follow the link above. Thank you.

elm.esu3.org

Elmwood-Murdock Public Schools

Our website has changed! Please update your bookmarks with the following URL: http:/ www.emknights.org. You should be redirected shortly. If not please follow the link above. Thank you.

elm.eu.org

ELM - Search the ELM resource

The Eukaryotic Linear Motif resource for. Functional Sites in Proteins. Showing a peptide from ELM class DOC USP7 MATH 1. A new ELM class has been annotated:. LIG 14-3-3 ChREBP 3. A new ELM class has been annotated:. LIG IRF3 LxIS 1. New instances added for. LIG Vh1 VBS 1. New instances have been added for. DEG SCF TRCP1 1. LIG LRP6 Inhibitor 1. We have added new instances for:. LIG APCC ABBA 1. LIG APCC ABBAyCdc20 2. DOC MAPK HePTP 8. DOC MAPK MEF2A 6. DOC MAPK DCC 7. MOD CDK 1 is now:. MOD CDK SPxK 1.

elm.eu.pn

債務整理に迅速、札幌エルム司法書士:Seoリンク

近視乱視治療のレーシックＬＡＳＩＫ. Nifty アットニフティが提供する個人向けレンタルサーバー. A href=http:/ www.sihousyosi-houjyou.jp/ target= blank 債務整理に迅速、札幌エルム司法書士 /a. 注意リンク集ページにリンクされる場合は、トップページから１階層目迄に制限 TOPページから１クリックで行けるリンクページされておりますのでご注意下さい。ページ内リンク数内部外部合計が100以上あるページからのリンクもお断りしております。 Adobe アドビソフトCreative Suiteが誰でも最大82 OFF! ストリーミングの動画講座がついているアドビソフト動画講座動画.tv. Http:/ www.only-item.net/. IPアドレス 76.191.99.167 ( us ). Http:/ www.whity-j.info/. 国産家具メーカーカリモクでは、木を想う匠とテクノロジーの融合をコンセプトに日本の新しい家具の形を追求。 Http:/ www.lasicx.info/.

elm.fr

ELM Technology

Création de site Internet. Nos solutions clés en main. Présent à vos côtés depuis plus de 20 ans,. ELM Technology vous accompagne dans la gestion de l’informatique au sein de votre société. Fort de notre expertise et de notre expérience, nous mettons à votre disposition des solutions clés en main en matière d’investissement, maintenance, location en informatique et bureautique, ainsi qu’en développement de logiciels, applications et site internet. Tél : 01.39.55.00.66. Location de matériel informatique.

elm.gr.jp

エルムの杜内科クリニック

Since Nov 3th.2002.

elm.help.edu.my

ELM Graduate School | LEADING THE ASIAN BUSINESS REVOLUTION: THE ELM WAY

MESSAGE FROM THE PRESIDENT AND VICE CHANCELLOR. MESSAGE FROM THE DEAN. Dr Chan has an interesting career as an academic, economic advisor, and entrepreneur. He is Co-Founder, Vice Chancellor and President of HELP University (Malaysia), and is also Co-Founder of HELP International Corporation, which is listed in the Malaysian Stock Exchange. THE DEAN OF ELM. ELM offers 14 postgraduate programmes such as Doctor of Business Administration, Graduate Certificate in Accounting, Master of Applied Psychology in ...

elm.hhchealth.org

Index Page

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