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openmms.sdsc.edu

http://openmms.sdsc.edu/

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~shamoo added addition analysis annotation availability available being biological biomedical cited cmview communications community computationalbiologytoolsanddatabases connecting contact content corba create database databases deposit devices discussed distribution dsg@sdsc email epath establish facilitate first formal format group guides hardware homophila however includes knowledge labome loader loads local longer macro macromolecular macromolecules mmcif molecular networks openmms organizing orion package parser passive pdbase pdbwiki please process protein query rdbms relation relational retrieval science server sharmaanimesh sheet software source structural structure structures success suite summary support supported systems tested through times together toolkit translator update users using value various version visualization website wishing yangdw years
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OpenMMS Home Page
Support Please note that OpenMMS is no longer being supported by the RCSB PDB. However, OpenMMS can be discussed on the OpenMMS Users Group's web site or email list.

http://openmms.sdsc.edu/

Structural Databases of Biological Macromolecules
... formal/macro_molecular.htm ePath The OpenMMS Toolkit. Corba, Relation Database and XML Software for Macromolecular Structure http://openmms.sdsc.edu/

http://www.els.net/WileyCDA/ElsArticle/refId-a0005252.html

The distribution and query systems of the RCSB Protein Data Bank
Users wishing to establish a CORBA server may do so now using C++ (http://deposit.pdb.org/mmcif/FILM/) or the Java OpenMMS software (http://openmms.sdsc.edu) . The ...

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC308830/

CMView - Protein contact map visualization and analysis
Loads PDB structures from a relational database in PDBase[1] or MSD[2] format. [1] http://openmms.sdsc.edu/OpenMMS-1.5.1_Std/openmms/docs/guides/PDBase.html

http://www.bioinformatics.org/cmview/manual.html

RCSB Protein Data Bank - RCSB PDB
Version 1.5.1 of the OpenMMS software toolkit is now available on the OpenMMS website at http://openmms.sdsc.edu. In addition to the fast database loader, this ...

http://www.rcsb.org/pdb/static.do?p=general_information/news_publications/news/news_2003.html

PDBWiki: added value through community annotation of the Protein ...
To facilitate the update process, we use the OpenMMS software package http://openmms.sdsc.edu to create a relational database from the data in the PDB.

http://www.biomedsearch.com/nih/PDBWiki-added-value-through-community/20624717.html

computationalbiologytoolsanddatabases - sharmaanimesh
OpenMMS Toolkit http://openmms.sdsc.edu A suite of Java source code that includes an mmCIF parser, RDBMS loader, XML translator, and Corba server

http://sites.google.com/site/sharmaanimesh/computationalbiologytoolsanddatabases

… Content Retrieval
Sheet 1 # of times tested # of success availability rate years cited first year cited # of times cited http://www.bioc.rice.edu/~shamoo http://yangdw.science.nus.edu ...

http://www.biomedcentral.com/content/supplementary/1472-6947-8-23-s1.xls

local area networks - Labome.Org - Organizing Biomedical Knowledge
Summary: Communications networks connecting various hardware devices together ... ..AVAILABILITY: http://openmms.sdsc.edu CONTACT: dsg@sdsc.edu..

http://www.labome.org/topics/information/computing/computer/computer/local-area-networks-21324.html

homophila.sdsc.edu
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