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  1. Keywords hit in search results
    about accuracy added analysis archive baker based between biocomputational bioinformatics biology biophysics calculations catalysed catalysis chemical chemistry collaboration computer conformational copenhagen created curtis david default dependent developed development dolinsky donald download downloaded effects empirical enzyme ephraim formed found google graduate graphical group harvey hosting information installed interface intersection involve janspage jensen locally lodola method molecular mulholland nathan online pdb2pqr performed piomelli popular positions prediction presented primarily program project properties propka propkawiki protein proteins python quantum rationalization reaction reactions register research researchers school scripts software source structural structure summary tarzia university webcite written zurek
PROPKA
The PROPKA Web Interface. Register and download the PROPKA source code and scripts: PROPKA Download. PROPKA plug-in for VMD can be downloaded here
http://propka.ki.ku.dk/
Graphical analysis of pH-dependent properties of proteins ...
formed online at http://propka.ki.ku.dk/, or locally, via the GUI, if the PROPKA program is installed on the same computer. By default, the pK a data from the
http://www.biomedcentral.com/content/pdf/1472-6807-11-6.pdf
JansPage - PropKaWiki - PROPKA
Research Summary. My work is primarily in the area of biocomputational chemistry – at the intersection between quantum chemistry and structural biology/bioinformatics.
http://propka.ki.ku.dk/~luca/wiki/index.php/JansPage
propka - The PROPKA 2.0 written in python - Google Project Hosting
The PROPKA 2.0 written in python. http://propka.ki.ku.dk/ Created by Donald Ephraim Curtis with help from Todd Dolinsky and Nathan Baker PROPKA 2.0 added by David M ...
http://code.google.com/p/propka/
Graphical analysis of pH-dependent properties of proteins ...
The pK a calculations can be performed online at http://propka.ki.ku.dk/, or locally, via the GUI, if the PROPKA program is installed on the same computer.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3038139/
BMC Structural Biology | Full text | Graphical analysis of pH ...
The pK a calculations can be performed online at http://propka.ki.ku.dk/ webcite, or locally, via the GUI, if the PROPKA program is installed on the same computer.
http://www.biomedcentral.com/1472-6807/11/6
Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions
http://propka.ki.ku.dk/ Lodola A, Mor M, Zurek J, Tarzia G, Piomelli D, Harvey JN, Mulholland AJ. Conformational effects in enzyme catalysis: Reaction via a ...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994064/
PDB2PQR - Software
PROPKA is developed by the Jensen Research Group at the University of Copenhagen. More information about PROPKA can be found at http://propka.ki.ku.dk/.
http://www.poissonboltzmann.org/pdb2pqr/
Graduate School of Molecular Biophysics - Positions (archive)
The project will involve development of our popular PROPKA program http://propka.ki.ku.dk for protein pKa prediction, and will be done in collaboration with researchers in ...
http://www.memphys.sdu.dk/graduateschool/positions_archive.php
Very fast empirical prediction and rationalization of protein pK a ...
A very fast empirical method is presented for structure-based protein pKa ... propka.ki.ku.dk ) ( doi ...
http://academic.research.microsoft.com/Paper/5236968
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