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Macromolecular Crystallography

PX users mailing list. Structural Molecular Biology at SSRL. Macromolecular Crystallography is a technique used to study biological molecules such as proteins, viruses and nucleic acids (RNA and DNA) to a resolution higher than 5Å. This high resolution helps elucidate the detailed mechanism by which these macromolecules carry out their functions in living cells and organisms. Protein molecules can crystallize under regulated conditions; the crystals. Updates on beamline facilities. 10, 20, 50-200.

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Macromolecular Crystallography | smb.slac.stanford.edu Reviews

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PX users mailing list. Structural Molecular Biology at SSRL. Macromolecular Crystallography is a technique used to study biological molecules such as proteins, viruses and nucleic acids (RNA and DNA) to a resolution higher than 5Å. This high resolution helps elucidate the detailed mechanism by which these macromolecules carry out their functions in living cells and organisms. Protein molecules can crystallize under regulated conditions; the crystals. Updates on beamline facilities. 10, 20, 50-200.

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Macromolecular Crystallography | smb.slac.stanford.edu Reviews

https://smb.slac.stanford.edu

PX users mailing list. Structural Molecular Biology at SSRL. Macromolecular Crystallography is a technique used to study biological molecules such as proteins, viruses and nucleic acids (RNA and DNA) to a resolution higher than 5Å. This high resolution helps elucidate the detailed mechanism by which these macromolecules carry out their functions in living cells and organisms. Protein molecules can crystallize under regulated conditions; the crystals. Updates on beamline facilities. 10, 20, 50-200.

INTERNAL PAGES

smb.slac.stanford.edu

1

Remote Unix Desktop

http://smb.slac.stanford.edu/facilities/remote_access/remote_desktop

The remote desktop software is called NoMachine Terminal Server and is a product of NoMachine. By using this software, we can provide the same computing environment remotely at your desk, as you would find locally at the crystallography beamline workstation. That includes access to the data processing servers with all crystallography software and the beamline control software (Blu-Ice). And is available on the Enterprise Evaluation download page. We are currently running two servers for remote access;.

2

Data Backup

http://smb.slac.stanford.edu/facilities/computing/backup.html

Transfer of data over the network. Backup to external Disk device. In a separate document. Back to Macromolecular Crystallography Computer Environment. This page lists the backup options SSRL supports and how to use them. If you feel there are other technologies that will be useful, please mention this in your End Of Run Summary and we will take your suggestions into consideration. Use file transfer commands like scp, sftp or rsync to transfer the data to another computer. DVD creation via web interface.

3

Macromolecular Crystallography - Beamline facilities: Hardware

http://smb.slac.stanford.edu/hardware

Experimental Equipment and Hardware. The SSRL Structural Molecular Biology Group currently operates five experimental stations dedicated to macromolecular crystallography (three more stations are in various stages of construction, upgrade or planning). These stations have a uniform user environment that achieves a high level of experimental automation and utilizes state-of-the-art area detector technology. Some of the standard hardware includes: detectors. Noble gas pressurization devices. The SSRL Macro...

4

Data Collection with Blu-Ice 5

http://smb.slac.stanford.edu/public/facilities/software/blu-ice

Data Collection at SSRL using Blu-Ice 5. Users" and "Staff" Tabs. Adjusting Beam Size and Energy. Data collection parameters and commands. Starting a data collection run. Uploading Crystal Information in a Spreadsheet. Viewing and Selecting Samples. Customizing the Spreadsheet Layout. Sample and Hutch Real-Time Video Display. Collecting Data after Automated Screening. Appendix: Absorption edge and main emission line energies. Snapshot (Single Spectrum) Mode. Helical Collection Tab Widgets.

5

Robotic Sample Handling - Newsgroup and Information Forum

http://smb.slac.stanford.edu/robosync

Newsgroup and Information Forum. The goal of this website and email newsgroup is to promote compatibility between systems and to inform experimenters about current technologies. Chart of available robotic sample handling systems at synchrotrons -. And srussi@slac.stanford.edu. The robo-sync email newsgroup. Is a forum for developers and experimenters from various labs to share information, ideas, and experiences related to automated sample handling and high throughput crystallography. ALS puck, Uni-puck.

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data.sbgrid.org

SBGrid Data Bank

https://data.sbgrid.org/data

Get Help ▼. For Depositors ▼. X-Ray Diffraction data from VHH-L66 in Complex with Prefusion RSV F, source of 5TOK structure. Data DOI: 10.15785/SBGRID/427. Publication DOI: 10.1038/ncomms14158. Published: March 3, 2017. Data DOI: 10.15785/SBGRID/427. Publication DOI: 10.1038/ncomms14158. X-Ray Diffraction data from Single-Domain Antibody F-VHH-4, source of 5TP3 structure. Crystal structure of the RSV-neutralizing single-domain antibody F-VHH-4. Data DOI: 10.15785/SBGRID/426. Published: March 3, 2017.

ssrl.slac.stanford.edu

Structural Molecular Biology, SSRL

http://ssrl.slac.stanford.edu/smb/index.html

Skip to main content. Small Angle X-Ray Scattering. X-Ray Spectroscopy and Imaging. Workshops and Summer Schools. Illuminating Biological Structures at the Atomic and Molecular Levels. Your browser does not support the video tag. SSRL's SMB program operates as an integrated resource and has three cores of technological research and development. Small Angle X-Ray Scattering. X-Ray Spectroscopy and Imaging. Metal ions have key roles in biological structure and function - from being active sites of many enz...

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Resources – Maduke Lab

https://maduke.stanford.edu/stanford-resources

2012: December 17 – Secret Santa. 2012: August 25 – BBQ on the Deck. 2012: April 21 – Sherwin’s Wedding. 2011-2012: Lab Members at Work. 2008-2009: Lab Members at Work. 2007 and older: Photo Archive. Stanford University School of Medicine. Molecular and Cellular Physiology Department. Stanford Synchrotron Radiation Laboratory. Macromolecular Crystallography at SSRL. Stanford Magnetic Resonance Laboratory. Stanford High-Throughput Bioscience Center. Stanford Shared FACS Facility. Stanford, CA 94305-5345.

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smb.slac.stanford.edu

Macromolecular Crystallography

PX users mailing list. Structural Molecular Biology at SSRL. Macromolecular Crystallography is a technique used to study biological molecules such as proteins, viruses and nucleic acids (RNA and DNA) to a resolution higher than 5Å. This high resolution helps elucidate the detailed mechanism by which these macromolecules carry out their functions in living cells and organisms. Protein molecules can crystallize under regulated conditions; the crystals. Updates on beamline facilities. 10, 20, 50-200.

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