Home page for the smweb.bcgsc.bc.ca site (BCGSC/CMSGSC). Information on the Sockeye 3D Comparative Genome (Genomics) browser, Chinook ( P2P peer-to-peer bioinformatics services ), and Web service solutions to whole genome alignments. Several weblog(s). The home of Stephen Montgomery at Canada's Michael Smith Genome Sciences Centre. http://smweb.bcgsc.bc.ca smweb.bcgsc.bc.ca smontgom bcgsc cmsgsc
http://smweb.bcgsc.ca/
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Stephen Montgomery @ CMSGSC | smweb.bcgsc.ca Reviews
https://smweb.bcgsc.ca
Home page for the smweb.bcgsc.bc.ca site (BCGSC/CMSGSC). Information on the Sockeye 3D Comparative Genome (Genomics) browser, Chinook ( P2P peer-to-peer bioinformatics services ), and Web service solutions to whole genome alignments. Several weblog(s). The home of Stephen Montgomery at Canada's Michael Smith Genome Sciences Centre. http://smweb.bcgsc.bc.ca smweb.bcgsc.bc.ca smontgom bcgsc cmsgsc
smweb.bcgsc.ca
Chinook P2P Bioinformatics
http://smweb.bcgsc.ca/chinook/index.html
Chinook is the winner of the Best Overall Application in the BCNET Coolest Applications Contest 2004. Montgomery SB, Guan J, Fu T, Lin K, Jones SJM "An application of peer-to-peer technology to the discovery, use and assessment of bioinformatics programs". Nature Methods, 2005. A flexible open-source framework for building web applications. Use Chinook Online now! ORC: Open Regulatory Competition. About Peer-to-peer computing and Chinook. The folks at Java.NET. Chinook Perl Engine for Batch Computing.
Publications (Montgomery SB)
http://smweb.bcgsc.ca/publications.html
Current version of CV (June 2011). Canada's Michael Smith Genome Sciences Centre. Genetics Graduate Program (UBC). Vancouver Bioinformatics Users Group. C) 2004 Stephen Montgomery, Canada's Michael Smith Genome Sciences Centre.
Resources
http://smweb.bcgsc.ca/resources.html
Resources: Escape from the Salmon. Whole Genome Alignment Data. Human, Mouse, and Rat data from UCSC and Berkeley has been made accessible through a MySQL database and a Java web service implementation. WGA Alignment Database and Web service. Return to the Salmon. These are images of the Sockeye Comparative Genome Browser in action. Most are vintage to version 1.1. Ant, CVS, Eclipse, and Tomcat for Life Science Developers. Online lab developed for CBW Developing the Tools, 2004 in Montreal, Canada.
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Resources
http://montgomerylab.stanford.edu/resources.html
Ancestry inference through microfluidic multiplex PCR and targeted sequencing. Detection of GxE interactions in transcriptome data. An efficient multiple hypothesis testing correction for eQTLs. A web server for investigating differential expression and splicing in idiopathic pulmonary fibrosis lung tissue. MmPCR-Seq Primer Design scripts. ORegAnno: Open Regulatory Annotation Database. A database of literature curated gene regulatory elements and regulatory variants. Sockeye, Chinook and CHuM. May 22nd, ...
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Stephen Montgomery @ CMSGSC
Jun 1st, 2011. This site is now defunct. Visit my lab at Stanford here. Canada's Michael Smith Genome Sciences Centre. Genetics Graduate Program (UBC). Vancouver Bioinformatics Users Group. C) 2004 Stephen Montgomery, Canada's Michael Smith Genome Sciences Centre.
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