acgt.cs.tau.ac.il

ACGT

We develop algorithms and tools for analysis of genomic and systems biology data. Areas include:. Methods for integrated analysis of gene expression, protein and genetic interactions, SNPs, etc. Modeling, dissection and inference of biological systems. Understanding mechanisms of transcription factor and microRNA control and evolution. Chromosomal aberrations in cancer, patient classification and biomarker selection in disease, disease genetics. Ron Shamir's personal homepage. Meet our group members.

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ACGT | acgt.cs.tau.ac.il Reviews

<META> DESCRIPTION

We develop algorithms and tools for analysis of genomic and systems biology data. Areas include:. Methods for integrated analysis of gene expression, protein and genetic interactions, SNPs, etc. Modeling, dissection and inference of biological systems. Understanding mechanisms of transcription factor and microRNA control and evolution. Chromosomal aberrations in cancer, patient classification and biomarker selection in disease, disease genetics. Ron Shamir's personal homepage. Meet our group members.

<META> KEYWORDS

1 Algorithms

2 Computational Biology

3 Bioinformatics

4 Ron Shamir

5 Systems Biology

6 Graphs

7 Combinatorics

8 Genomics

9 Proteomics

10 software

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news,research interests,positions available,group members,research,projects,theses,intl grants,collaborators,publications,talks,seminars,presentations,links,site map,private,high throughput genomics,biological networks,transcription regulation,members

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ACGT | acgt.cs.tau.ac.il Reviews

https://acgt.cs.tau.ac.il

We develop algorithms and tools for analysis of genomic and systems biology data. Areas include:. Methods for integrated analysis of gene expression, protein and genetic interactions, SNPs, etc. Modeling, dissection and inference of biological systems. Understanding mechanisms of transcription factor and microRNA control and evolution. Chromosomal aberrations in cancer, patient classification and biomarker selection in disease, disease genetics. Ron Shamir's personal homepage. Meet our group members.

INTERNAL PAGES

acgt.cs.tau.ac.il

1

Theses

http://acgt.cs.tau.ac.il/group_theses.php

PhD and MSc theses. MSc thesis, 56 pp., June 2016. Reconstructing cancer karyotypes from paired-end reads and copy number data. PhD thesis, 114 pp., December 2015. Novel methods for integrative analysis of heterogeneous large scale biomedical data. PhD thesis, 121 pp., October 2015. Unsupervised characterization of human brain networks that are involved in emotional processing and regulation. PhD thesis, 66 pp., September 2014. Discovering motifs using high-throughput in vitro data. Feature selection met...

2

Presentations

http://acgt.cs.tau.ac.il/group_presentations.php

Lectures about the group's work. Utilizing diverse omic data from many cancer studies: proof of concept and applications". TAU-University of Toronto joint workshop on Big-data and Health, Tel Aviv University, Tel Aviv, Israel, November 1-2, 2016. Modularity and classification through the network lens". Invited speaker, QNetS Workshop: What s new in networks? Building bridges between computational, mathematical and statistical network analysis, Ludwig-Maximilian Universitaet Munich,. October 5-7, 2016.

3

National and International Collaborative Grants

http://acgt.cs.tau.ac.il/group_international_projects.php

National and International Collaborative Grants. Gene Regulation for Complex Human Diseases. I-CORE - Israeli Center for Research Excellence. Tackling the Response to Ionizing Radiation by Extensive Multilevel Exploration. R Aebersold (ETH Zurich, Switzerland). A Venkitaraman (University of Cambridge , UK ). J Bartek (Institute of Molecular Genetics , Prague, Czech Republic). H Lehrach (Max Planck Institute for Molecular Genetics, Berlin, Germany). Y Shiloh (Tel Aviv University, Israel). E Barillot (Inst...

4

Group Collaborators

http://acgt.cs.tau.ac.il/group_collaborators.php

Collaborators: co-authors and co-editors. Max Planck Inst. Berlin. Max Planck Inst. Berlin. University of California San Francisco. Scripps Research Institute, San Diego. Max Planck Inst. Berlin. U C Santa Barbara. Scripps Research Institute, San Diego. Scripps Research Institute, San Diego and University Hospital Schleswig Holstein, Germany. U C San Diego. Institute Pasteur, Paris.

5

Links

http://acgt.cs.tau.ac.il/group_links.php

Bioinformatics research and education programs. Bioinformatics research and education programs. Edmond J. Safra Center for Bioinformatics. BSc in Bioinformatics at Tel Aviv University. MSc in Bioinormatics at Tel aviv University. Bioinformatics BSc studies at Bar Ilan University. Bioinformatics graduate program at Haifa University. Bioinformatics BSc at Tel Aviv University - curriculum (Hebrew). Bioinformatics unit at Tel-Aviv University. Bioinformatics unit at the Hebrew University. For theoretical comp...

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sysbio.curie.fr

Computational Systems Biology of Cancer group | Projects

https://sysbio.curie.fr/projects.html

Chemotaxis in cancer (2016-2019) ITMO HTE Program. PRECISE EU Horizon-2020 (2015-2018). COLOSYS EU EracoSysMed (2015-2018). M5 ITMO Cancer SysBio program (2015-2018). M5 abbreviation stands for Mathematical Modeling of Molecular Mechanisms involved in Medulloblastoma progression. PSL Institute for Data Science: Big Data PSL Research University project (2016-2018). APLIGOOGLE CNRS MASTODON project (2016). MOSAIC ITMO Cancer SysBio program (2014-2017). We aim at characterizing and mathematical modeling the...

$math.tau.ac.il$ math.tau.ac.il

Ron Shamir's personal homepage

http://www.math.tau.ac.il/~rshamir

Sackler professor of Bioinformatics. The Blavatnik School of Computer Science. E-Mail: rshamir AT tau DOT ac DOT il. 149; Online available publications. Publication lists: pdf. 149; Google scholar. 149; Microsoft Academic Search. Hearts; Computational Biology / Bioinformatics ♣ Graph Algorithms ♠ Optimization. Advanced Topics in Computational Genomics. Full listing including past years. Algorithms in Molecular Biology (Computational Genomics). Analysis of DNA Chips and Gene Networks.

cs.tau.ac.il

Ron Shamir's personal homepage

http://www.cs.tau.ac.il/~rshamir/index.html

Sackler professor of Bioinformatics. The Blavatnik School of Computer Science. E-Mail: rshamir AT tau DOT ac DOT il. 149; Online available publications. Publication lists: pdf. 149; Google scholar. 149; Microsoft Academic Search. Hearts; Computational Biology / Bioinformatics ♣ Graph Algorithms ♠ Optimization. Advanced Topics in Computational Genomics. Full listing including past years. Algorithms in Molecular Biology (Computational Genomics). Analysis of DNA Chips and Gene Networks.

hueffner.de

Sharon Hüffner

http://www.hueffner.de/sharon

I obtained my PhD at the International Max Planck Research School for Computational Biology and Scientific Computing. IMPRS-CBSC) at Freie Universität Berlin. My PhD research was on network analysis and graph algorithms, in particular fuzzy clustering of networks using spectral analysis, with applications in bioinformatics. Nowadays, I am working for Nexgate. A division of Proofpoint. As Senior Data Scientist. Where I have been in former times. IMPRS-CBSC) at the Biocomputing Group. 15th Annual Internati...

bioinformatics.psb.ugent.be

MORPH (MOdule guided Ranking of candidate PatHway genes)

http://bioinformatics.psb.ugent.be/webtools/morph

If you use Morph, please cite us at Plant Cell. Download standalone Morph R package with documentation (.zip). MOdule guided Ranking of candidate PatHway genes. Enter your genes of interest (pathway genes) below, separated by whitespace or commas. (You can leave this field empty to submit the example shown):. Or upload a genes of interest file (same format as above):. Max candidate genes to display. Morph was developed by Didi Amar ( Ron Shamir's lab.

tau.ac.il

BARCODE

http://www.tau.ac.il/~rozovr/barcode

Fast Lossless Compression via Cascading Bloom Filters. BARCODE is freely available under the GNU Lesser General Public License. Version 3, or any later version. ACGT - Ron Shamir's Lab. Cozygene - Eran Halperin's Lab. 2014 BARCODE Design by FreeCSSTemplates.org.

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acgt.co.jp

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acgt.co.za

ACGT | African Centre For Gene Technologies

The African Centre for Gene Technologies (ACGT). Is an initiative that involves the ARC (Agricultural Research Council), CSIR (Council for Scientific and Industrial Research) and the Universities of Johannesburg, Pretoria and the Witwatersrand. The aim is to create a collaborative network of excellence in advanced biotechnology, with specific focus on the -omics . Enhancing biopharming for an emerging bioeconomy. Spotlight on malaria case management. December 2014 - The ACGT hosted the 5th national prote...

acgt.com

:: ACGT Sdn Bhd - Creating oil crops to feed and fuel the world sustainably ::

Our Vision and Mission. Our Crops of Interest.

acgt.com.br

ACGT - Faça parte | Associação dos Colaboradores do Grupo Tejofran

São mais de 70 Convênios para você e sua Família. ENXOVAL DO RECÉM NASCIDO. Você pode obter o benefício do Enxoval do Bebê. Faça parte da ACGT! Oferece diversos benefícios voltados à educação, saúde, lazer e bem estar de seus associados e dependentes. Para se associar é fácil, basta clicar em ASSOCIE-SE, preencher o cadastro ou imprimir o termo de adesão em anexo e encaminhá-lo para a ACGT. Por fax ou e-mail. Clique aqui e saiba mais…. Em parceria com a PRODENT, oferecem um excelente Plano Odontológico.

acgt.com.my

:: ACGT Sdn Bhd - Creating oil crops to feed and fuel the world sustainably ::

Our Vision and Mission. Our Crops of Interest.

acgt.cs.tau.ac.il

ACGT

We develop algorithms and tools for analysis of genomic and systems biology data. Areas include:. Methods for integrated analysis of gene expression, protein and genetic interactions, SNPs, etc. Modeling, dissection and inference of biological systems. Understanding mechanisms of transcription factor and microRNA control and evolution. Chromosomal aberrations in cancer, patient classification and biomarker selection in disease, disease genetics. Ron Shamir's personal homepage. Meet our group members.

acgt.de

Acgt.de

Melden Sie sich jetzt an und erhalten Sie regelmäßig Informationen über neue Produkte, Sonderangebote oder neue Gutscheine. Gekennzeichnete Felder sind Pflichtfelder. Years of the 19th Century in Rugby Union: 1870 in Rugby Union, 1871 in Rugby Union, 1872 in Rugby Union, 1873 in Rugby Union. Rugby Union at the Maccabiah: Rugby Union at the 2009 Maccabiah Games, Rugby Union at the Maccabiah Games. Teeburon To Rugby or not to Rugby, what a stupid question Mug. Herren, Schwarz, Motiv Keep Calm and play Rugb...

acgt.dk

acgt.dk | tools and links for bioinformatics - alignment - prediction - markov models - hmm

acgt.ercim.eu

ACGT: ACGT

Use an ACGT resource. Add my resource to ACGT. You are here: Home. View Summer 2010 Issue. If you want to subscribe to the ACGT newsletter, please send us an email. ACGT project ended end of July 2010. For more information please contact ACGT's coordinators:. Mrs Jessica Michel Assoumou. You can download ACGT's success stories videos by following the links below:. 666MB - 32:46 min]. 238MB - 8:34 min]. 97MB - 0:20 min]. Welcome to the ACGT website. News published on: Mon, Jul 12, 2010. Scientists and phy...

acgt.info

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acgt.me

ACGT

Thoughts on biology, genomics, and the ongoing threat to humanity from the bogus use of bioinformatics acronyms, by Keith Bradnam. Chromosome-Scale Scaffolds And The State of Genome Assembly →. March 31, 2017. Keith Robison has written another fantastic post on his Omics! Blog which is a great read for two reasons. First he looks at the issues regarding chromosome-size scaffolds that can now be produced with Hi-C sequencing approches. Hi-C (in vitro or in vivo). Rapid Physical Maps (BioNano Genomics).