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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Jim Kent's page (BLAT). Bull; Affymetrix probe set identifier. Example: "200034 s at". Affy probe set ID. Bull; NCBI Entrez Gene identifier. Bull; ENSEMBL gene identifier. Bull; HUGO gene identifier. Bull; Gene official symbol. Bull; Word or phrase in gene official name. Please use the following reference when citing PLANdbAffy. Nurtdinov RN*, Vasiliev MO, Ershova AS, Lossev IS, Karyagina AS.

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays | affymetrix2.bioinf.fbb.msu.ru Reviews

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Jim Kent's page (BLAT). Bull; Affymetrix probe set identifier. Example: 200034 s at. Affy probe set ID. Bull; NCBI Entrez Gene identifier. Bull; ENSEMBL gene identifier. Bull; HUGO gene identifier. Bull; Gene official symbol. Bull; Word or phrase in gene official name. Please use the following reference when citing PLANdbAffy. Nurtdinov RN*, Vasiliev MO, Ershova AS, Lossev IS, Karyagina AS.

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3 publications

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5 affymetrix official site

6 ucsc genome browser

7 vista genome browser

8 clone/gene id converter

9 probe set search

10 gene search

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays | affymetrix2.bioinf.fbb.msu.ru Reviews

https://affymetrix2.bioinf.fbb.msu.ru

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Jim Kent's page (BLAT). Bull; Affymetrix probe set identifier. Example: "200034 s at". Affy probe set ID. Bull; NCBI Entrez Gene identifier. Bull; ENSEMBL gene identifier. Bull; HUGO gene identifier. Bull; Gene official symbol. Bull; Word or phrase in gene official name. Please use the following reference when citing PLANdbAffy. Nurtdinov RN*, Vasiliev MO, Ershova AS, Lossev IS, Karyagina AS.

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays

http://affymetrix2.bioinf.fbb.msu.ru/files.html

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Text files containing the information about the mapping and annotation for good (green) probes:. HG-U133 Plus2.green.flat.gz. HG-U133A.green.flat.gz. HG-U133B.green.flat.gz. HuGene-1 0.green.flat.gz. HuEx-1 0.green.flat.gz. Text files containing the information about the mapping and annotation for all probes:. HuEx-1 0.full.flat.gz. HuGene-1 0.full.flat.gz. HG-U133 Plus2.full.flat.gz. HG-U133A.full.flat.gz.

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays

http://affymetrix2.bioinf.fbb.msu.ru/description.html

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. For this. Analysis we selected three 3' Gene arrays, Affymetrix HG-U133 Plus 2.0, HG-U133A and HG-U133B, and two Exon&Gene. Level arrays, Human Gene 1.0 and Human Exon 1.0. Probe sequences were mapped to the genome using Blat. We allowed alignments with no more than two mismatches and. Regions. Unlike the gr...

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nar.oxfordjournals.org

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays

http://nar.oxfordjournals.org/content/38/suppl_1/D726.long

View Current Issue (Volume 44 Issue 14 19 August 2016). PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Ramil N. Nurtdinov. Mikhail O. Vasiliev. Anna S. Ershova. Ilia S. Lossev. Anna S. Karyagina. Departament of Bioengineering and Bioinformatics, M.V. Lomonosov Moscow State University, Vorbyevy Gory 1-73, Moscow 119992, Russia,. Moscow Institute of Physics and Technology, Institutskii per. 9, Dolgoprudny, Moscow Region 141700,. August 14, 2009. October 12, 2009. The maj...

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PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays

PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays. Jim Kent's page (BLAT). Bull; Affymetrix probe set identifier. Example: "200034 s at". Affy probe set ID. Bull; NCBI Entrez Gene identifier. Bull; ENSEMBL gene identifier. Bull; HUGO gene identifier. Bull; Gene official symbol. Bull; Word or phrase in gene official name. Please use the following reference when citing PLANdbAffy. Nurtdinov RN*, Vasiliev MO, Ershova AS, Lossev IS, Karyagina AS.

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