bio-lark.org

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

Phenotype silver standard corpora. HPO gold standard and test suite corpora. Australian Research Council (ARC) - Linkage grant SKELETOME (LP100100156). Australian Research Council (ARC) - Discovery Early Career Researcher Award (DECRA) (DE120100508). Australian National Health and Medical Research Council APP1055319 under the NHMRC European Union Collaborative Research Grants scheme. The project received continuous support from the International Rare Disease Research Consortium. SKELETOME Knowledge base:...

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.:: Bio-LarK - Biomedical Large Knowledge Collider ::. | bio-lark.org Reviews

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Phenotype silver standard corpora. HPO gold standard and test suite corpora. Australian Research Council (ARC) - Linkage grant SKELETOME (LP100100156). Australian Research Council (ARC) - Discovery Early Career Researcher Award (DECRA) (DE120100508). Australian National Health and Medical Research Council APP1055319 under the NHMRC European Union Collaborative Research Grants scheme. The project received continuous support from the International Rare Disease Research Consortium. SKELETOME Knowledge base:...

<META> KEYWORDS

1 bio lark

2 resources

3 concept recognizer

4 rest api

5 sparql endpoints

6 mouse data

7 bone disorders

8 the team

9 publications

10 medical lar

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bio lark,resources,concept recognizer,rest api,sparql endpoints,mouse data,bone disorders,the team,publications,medical lar,ge k,nowledge collider,funding acknowledgements,anika oellrich

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.:: Bio-LarK - Biomedical Large Knowledge Collider ::. | bio-lark.org Reviews

https://bio-lark.org

Phenotype silver standard corpora. HPO gold standard and test suite corpora. Australian Research Council (ARC) - Linkage grant SKELETOME (LP100100156). Australian Research Council (ARC) - Discovery Early Career Researcher Award (DECRA) (DE120100508). Australian National Health and Medical Research Council APP1055319 under the NHMRC European Union Collaborative Research Grants scheme. The project received continuous support from the International Rare Disease Research Consortium. SKELETOME Knowledge base:...

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phenoday2015.bio-lark.org

Phenotype day @ ISMB 2015

The Phenotype day is an initiative developed jointly with the Bio-Ontologies. Biology as well as computational biology. Genomics, clinical genetics, pharmacogenomics, healthcare. Text/data mining and knowledge discovery. Knowledge representation and ontology engineering. Example topics include but are not limited to:. Ontologies (pre- and post-composed). Acquisition of phenotype descriptions. NLP annotation tools and pipelines. Tools and methods to support data curation for phenotypes. Ferdinand Dhombres...

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bio-lark.org

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.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

http://www.bio-lark.org/se_mouse.html

Phenotype silver standard corpora. HPO gold standard and test suite corpora. SPARQL Endpoint: Mouse data. This SPARQL Endpoint integrates mouse and human data retrieved from the following data sources (the diagram on the left depicts the integration workflow):. And the Missense Mutation Library. Kyoto Encyclopedia of Genes and Genomes. Online Mendelian Inheritance in Man. 1 Choose a Query. 2 Customise Your Query. Results ({ results.results.bindings.length } ). 100" Back to Top.

2

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

http://www.bio-lark.org/se_skeldys.html

Phenotype silver standard corpora. HPO gold standard and test suite corpora. SPARQL Endpoint: Rare bone disorders. This SPARQL Endpoint integrates rare bone disorders knowledge retrieve from the following sources:. The International Skeletal Dysplasia Society. Online Mendelian Inheritance in Man. Groups of bone disorders. 1 Choose a Query. 2 Customise Your Query. Results ({ results.results.bindings.length } ). 100" Back to Top.

3

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

http://www.bio-lark.org/pheno_res.html

Phenotype silver standard corpora. HPO gold standard and test suite corpora. Phenotype silver standard corpora. This page aims provides the individual stand-off phenotype annotations created using four concept recognition systems on four corpora. In addition, for each textual corpus, system-based silver standard corpora have been created using both exact matching, as well as sentence-level matching. The four systems are:. The four corpora are:. A corpus of 2,163 publication abstracts from Pubmed.

4

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

http://www.bio-lark.org/index.html

Phenotype silver standard corpora. HPO gold standard and test suite corpora. Australian Research Council (ARC) - Linkage grant SKELETOME (LP100100156). Australian Research Council (ARC) - Discovery Early Career Researcher Award (DECRA) (DE120100508). Australian National Health and Medical Research Council APP1055319 under the NHMRC European Union Collaborative Research Grants scheme. The project received continuous support from the International Rare Disease Research Consortium. SKELETOME Knowledge base:...

5

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

http://www.bio-lark.org/hpo_res.html

Phenotype silver standard corpora. HPO gold standard and test suite corpora. HPO gold standard and test suite corpora. HPO gold standard corpus. Hpo corpus xml.tar.gz. Hpo corpus text.tar.gz. Hpo corpus annot.tar.gz. HPO test suites corpus. Hpo testsuites.tar.gz. Containing stop words (WITH). Containing stop words (TO). Containing stop words (OF). Containing stop words (IN). Containing stop words (BY). Containing stop words (FROM).

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human-phenotype-ontology.github.io

Users | Human Phenotype Ontology

http://human-phenotype-ontology.github.io/people.html

The users of HPO. NIH Undiagnosed disease program (UDP). Mouse Genome Informatics (MGI). International Rare Diseases Research Consortium (IRDiRC). International Collaboration for Clinical Genomics (ICCG). NCBI Genetic Testing Registry. MORPHIN (Model Organisms Projected on a Human Integrated Gene Network). Superfamily Structural classification of protein. GEPADO Software Solutions for Genetics - GmbH. Selected papers that use HPO. Köhler, Sebastian, et al. Clinical interpretation of CNVs with cross-s...

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bio-lark.org

.:: Bio-LarK - Biomedical Large Knowledge Collider ::.

Phenotype silver standard corpora. HPO gold standard and test suite corpora. Australian Research Council (ARC) - Linkage grant SKELETOME (LP100100156). Australian Research Council (ARC) - Discovery Early Career Researcher Award (DECRA) (DE120100508). Australian National Health and Medical Research Council APP1055319 under the NHMRC European Union Collaborative Research Grants scheme. The project received continuous support from the International Rare Disease Research Consortium. SKELETOME Knowledge base:...

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