bioinfo-minzhao.org
Bioinformatics webpage by Dr. Min Zhao at university of sunshine coastBioinformatics researcher Min Zhao
http://www.bioinfo-minzhao.org/
Bioinformatics researcher Min Zhao
http://www.bioinfo-minzhao.org/
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Bioinformatics webpage by Dr. Min Zhao at university of sunshine coast | bioinfo-minzhao.org Reviews
https://bioinfo-minzhao.org
Bioinformatics researcher Min Zhao
ECGene database Home
Type 1 vs Type2 EC. Compare the expression difference between type 1 and type 2 endometrial cancers in 12 studies. Inquire into the curated literatures about EC-related genes. Explore what are the relevant biological pathways based on our curated ECGene-related genes. Find out the orthologous genes related to ECGene in non-model species. ECGene is committed to establishing a comprehensive gene resource for endometrial cancer. Curated endometrial cancer genes from thousands of literatures.
Regeneration gene database Home
Find out the orthologous genes related to regeneration in non-model species. Obtain global view on the regeneration gene expression in various human bodymap. Explore what are the relevant biological pathways based on our curated regeneration-related genes. Inquire into the curated literatures about regeneration. REGene is committed to establishing a comprehnsive gene resource for Regeneration. News and forthcoming changes. Sea urchin orthologs were added to REGene. Number of genes in REGene.
Min Zhao, bioinformatics webpage
Everyone need refresh to get new ideas, why not travelling? Do something you never try. Web server for copy-number variation, CNVannotator. Database related to tumor suppressor is online, TSGene. Database related to EMT is online, dbEMT. Database related to pediatric cancer is online, PediCan. Database related to human intelligence quotient is online, IQ gene. Database related to animal regeneration is online, REGene. Database related to land snail Theba Pinasa is online, ThebaDB.
Theba pisana gene database Home
Obtain global view on the gene expression for genes in central nervous systems, foot muscle, hepatopancreas of Theba pisana. Explore what are the relevant biological pathways based on our Theba pisana transcriptomes. Find out the protein interaction partner in the Theba pisana. Inquire into the annotated protein functional domains of Theba pisana. Theba pisana gene database. ThebaDB is committed to establishing a comprehnsive gene resource for Theba pisana. News and forthcoming changes.
CSGene database Home
Obtain global view on the CSGene expression in various human normal and cancer tissues. Explore what are the relevant biological pathways based on our curated CSGene-related genes. Find out the orthologous genes related to CSGene in non-model species. Inquire into the curated literatures about CSGene. CSGene is committed to establishing a comprehnsive gene resource for cell senescence. News and forthcoming changes. 1448 homologs were added to CSGene. Gene expression dataset were added to CSGene.
lnCaNet database Home
Obtain global view on the lncRNA co-expression in various human cancers. Explore the precomputed 110 lncRNA co-expression networks in pan-cancer level. The comprehensive collection of cancer genes from 10 data sources. Find out what is the tissue specificity for a lncRNA with expression profiles from normal and cancer tissues. LnCaNet is committed to establishing a comprehensive regulatory network resource for lncRNA. And cancer genes. It includes:. Comprehensive cancer gene list.
MSGene database Home
Obtain global view on the MSGene expression in various human bodymap. Explore what are the relevant biological pathways based on our curated MSGene-related genes. Find out the orthologous genes related to MSGene in non-model species. Inquire into the curated literatures about MSGene. MSGene is committed to establishing a comprehnsive gene resource for Metastasis suppressor. News and forthcoming changes. 1448 homologs were added to MSGene. Gene expression dataset were added to MSGene.
Pediatric cancer gene database (Pedican) Home
Obtain global view on the gene expression in various samples of normal, adult and pediatric cancer. Explore what are the relevant biological pathways based on our curated pediatric cancer-related genes. Find out how genetic variants affect the pediatric cancer. Inquire into the curated literatures about pediatric cancer. Pediatric cancer gene database. Pedican is committed to establishing a comprehnsive gene resource for pediatric/childhood cancer. News and forthcoming changes. Number of genes in Pedican.
Min Zhao bioinformatics research webpage
This is Min Zhao, a bioinformatics guy. All the files are free to academic researchers world wide. Not for profit purposes. All the 377 human Epithelial-Mesenchymal Transition genes with cancer types. The protein fasta files here. The DNA sequence here. The 90 genes here. The 716 tumor suppressor genes:. The flat files here. The protein fasta files here. The 90 genes here. The human genes with pathway annotation:. The flat files here. When using these resources for publications, please cite:.
Epithelial-Mesenchymal Transition gene database (dbEMT) Home
Obtain global view on the gene expression in various samples of normal, adult and Epithelial-Mesenchymal Transition. Explore what are the relevant biological pathways based on our curated Epithelial-Mesenchymal Transition-related genes. Find out how genetic variants affect the Epithelial-Mesenchymal Transition. Inquire into the curated literatures about Epithelial-Mesenchymal Transition. DbEMT is committed to establishing a comprehnsive gene resource for epithelial-mesenchymal transition (EMT).
bioinfo-minzhao.org
Min Zhao, bioinformatics webpage
http://www.bioinfo-minzhao.org/soft.html
Everyone need refresh to get new ideas, why not travelling? Do something you never try. Web server for copy-number variation, CNVannotator. Database related to tumor suppressor is online, TSGene. Database related to EMT is online, dbEMT. Database related to pediatric cancer is online, PediCan. Database related to human intelligence quotient is online, IQ gene. Database related to animal regeneration is online, REGene. Database related to land snail Theba Pinasa is online, ThebaDB.
Bioinformatics webpage by Dr. Min Zhao at university of sunshine coast
http://www.bioinfo-minzhao.org/publication.html
Publications (* co-first author, # corresponding author). Hemnes. AR, Zhao M *. West J, Newman. JH, Rich. S, Archer. SL, Robbins. IM, Blackwell. TS, Cogan. J, Loyd. JE, Zhao. Z, Gaskill. C, Jetter. C, Kropski. JA, Majka. SM and Austin. ED. Critical Genomic Networks and Vasoreactive Variants in Idiopathic Pulmonary Arterial Hypertension. American Journal of Respiratory and Critical Care Medicine. 2016. Liu Y and Zhao M #. Rotgans. B, Wang. T and Cummins. SF. REGene: a literature-based know...Yining Liu, F...
Bioinformatics webpage by Dr. Min Zhao at university of sunshine coast
http://www.bioinfo-minzhao.org/index.html
Bioinformatics, Min Zhao. Become a next generation sequencing data scientist. How do we use the vast amounts of genetic information to sharp the future of biomedical research? This is bioinformatics website for Dr. Min Zhao. My current research interests are focussed on the identification of genetic mutations associated with key biological pathways in drug response, together with the development of bioinformatics software for identifying biomarkers for personalised medicine. More about my research. The h...
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Pathway
http://dbemt.bioinfo-minzhao.org/pathway.cgi
Epithelial-Mesenchymal Transition gene database (dbEMT) Home. Pathway Name (Number of Epithelial-Mesenchymal Transition genes). Pathways in cancer - Homo sapiens (human) (45). Cytokine-cytokine receptor interaction - Homo sapiens (human) (38). HTLV-I infection - Homo sapiens (human) (33). Proteoglycans in cancer - Homo sapiens (human) (33). Metabolic pathways - Homo sapiens (human) (31). PI3K-Akt signaling pathway - Homo sapiens (human) (30). Focal adhesion - Homo sapiens (human) (27). Wnt signaling path...
Blast
http://dbemt.bioinfo-minzhao.org/blast.cgi
Epithelial-Mesenchymal Transition gene database (dbEMT) Home. Choose program to use and database to search:. Enter sequence below in FASTA. Or load it from disk. The query sequence is filtered. For low complexity regions by default. Mask for lookup table only. Query Genetic Codes (blastx only). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12). Database Genetic Codes (tblast[nx] only). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12).
Pedican
http://pedican.bioinfo-minzhao.org/gene_fusion.cgi
Pediatric cancer gene database (Pedican) Home. Multiple primary alveolar rhabdomyosarcomas. Small round cell Tumors. Small round cell Tumors. Small round cell Tumors. Peripheral primitive neuroectodermal Tumor Â. Pediatric cancer database is managed by.
Document
http://dbemt.bioinfo-minzhao.org/tutorial.cgi
Epithelial-Mesenchymal Transition gene database (dbEMT) Home. Data collection of dbEMT and how to use dbEMT:. Data collection of dbEMT database. Four steps to collect Epithelial-Mesenchymal Transition genes. Curation Epithelial-Mesenchymal Transition genes from literature. Information for Epithelial-Mesenchymal Transition genes. General information and literature evidence. Query and search database. Text search of Epithelial-Mesenchymal Transition gene. Quick access information in database. Construction ...
Pediatric cancer gene database (Pedican) Home
http://pedican.bioinfo-minzhao.org/index.html
Obtain global view on the gene expression in various samples of normal, adult and pediatric cancer. Explore what are the relevant biological pathways based on our curated pediatric cancer-related genes. Find out how genetic variants affect the pediatric cancer. Inquire into the curated literatures about pediatric cancer. Pediatric cancer gene database. Pedican is committed to establishing a comprehnsive gene resource for pediatric/childhood cancer. News and forthcoming changes. Number of genes in Pedican.
Entrez Gene
http://pedican.bioinfo-minzhao.org/gene_mutation.cgi?gene=7490
Pediatric cancer gene database (Pedican) Home. AWT1 EWS-WT1 GUD NPHS4 WAGR WIT-2 WT33;Wilms tumor 1;WT1;Wilms tumor 1. Wilms tumor protein amino-terminal domain of EWS last three zinc fingers of the DNA-binding domain of WT1. PCGP germline mutation [Top]. There is no record for WT1. PCGP somatic mutation [Top]. Variant (Variant; Chr; Position). Genotype (MutationType; MutationClass; ReferenceAllele; Genotype; Origin). Disease (CancerType; ValidationStatus; SequencingType). WT1 R380fs; chr11; 32417914.
MSGene database Home
http://msgene.bioinfo-minzhao.org/index.html
Obtain global view on the MSGene expression in various human bodymap. Explore what are the relevant biological pathways based on our curated MSGene-related genes. Find out the orthologous genes related to MSGene in non-model species. Inquire into the curated literatures about MSGene. MSGene is committed to establishing a comprehnsive gene resource for Metastasis suppressor. News and forthcoming changes. 1448 homologs were added to MSGene. Gene expression dataset were added to MSGene.
Blast
http://msgene.bioinfo-minzhao.org/blast.cgi
Metastasis suppressor gene database (PCdb) Home. Choose program to use and database to search:. Enter sequence below in FASTA. Or load it from disk. The query sequence is filtered. For low complexity regions by default. Mask for lookup table only. Query Genetic Codes (blastx only). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12). Database Genetic Codes (tblast[nx] only). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12).
TOTAL LINKS TO THIS WEBSITE
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CAPIH
Search by Gene Description. Search by GO Description. Search by Protein Domain Description. If you have any questions, please email your comments to :. HIV-1 Gag binds to AP-2, and this binding is dependent on tyrosine residue 132 and valine residue 135 at the matrix-capsid junction in the Gag polyprotein. Vif plays an important role in promoting HIV-1 binding to CD4. Increased susceptibility of HIV-infected cells to Fas killing has been mapped to the HIV-1 vpu gene. The localization of the HIV-1 reverse...
bioinfo-fr.net | Le repère des Geekus biologicus
6 ans et des questions! Vous ne le saviez peut-être pas mais nous venons de souffler fièrement notre sixième bougie! Que de savoir autour de la bioinformatique partagé! Merci à toutes et à tous pour vos soutiens sans faille. On voulait marquer le coup cette année : nous avons donc mis en place un questionnaire orienté autour du quotidien d'un(e) bioinformaticien(ne). Trêve de blabla, ça se passe ici :. Date de fermeture du questionnaire : 30 avril 2018. Lun 12 Mar 2018. Jeu 8 Mar 2018. Jeu 8 Fév 2018.
Bioinformatics : What lies Beyond the Horizon !
Bioinformatics : What lies Beyond the Horizon! Thursday, May 13, 2010. The role of blogging in Biology – Biogging. And http:/ practicalfragments.blogspot.com/. Maths statistics biology physics chemistry bioinformatics. Saturday, February 6, 2010. Choosing between academia and industry. 7Plan for the long term. 8Keep your options open. 10Be honest with yourself. But get impressions; record everything. Down to your gut feelings. Monday, November 23, 2009. Microsoft goes open : Thanks to Bioinformatics.
bioinfo.hr
Grants & awards. The Bioinformatics group is located in the Department of Molecular Biology at the Division of Biology, Faculty of science in Zagreb, Croatia. The group was formed in 2002 in an effort to include bioinformatics and computational biology courses in the molecular biology curriculum at the Faculty of Science and to motivate students for research in this prominent and highly interesting new field of biology. We are open to all forms of collaborative activities! Our present research interests ...
BIOINFO@LYON - Master Bioinfo@Lyon (Université Lyon 1)
Formation de l'Université Claude Bernard Lyon 1. Organisation de la formation. Organisation de la formation. La bioinformatique moléculaire est un facteur de mutation rapide de nos société et se généralise dans de nombreux secteurs d'activité tels que la médecine, l'agronomie, l'environnement ou encore l'industrie. C'est également un secteur en évolution constante tant au niveau des données toujours plus nombreuses et plus complexes que de ses applications de plus en plus diverses et technologiques.
Bioinformatics webpage by Dr. Min Zhao at university of sunshine coast
Bioinformatics, Min Zhao. Become a next generation sequencing data scientist. How do we use the vast amounts of genetic information to sharp the future of biomedical research? This is bioinformatics website for Dr. Min Zhao. My current research interests are focussed on the identification of genetic mutations associated with key biological pathways in drug response, together with the development of bioinformatics software for identifying biomarkers for personalised medicine. More about my research. The h...
Welcome to the Frontpage
Creating a new SVN/Trac Project. Welcome to the Frontpage. Welcome to the Frontpage. Creating a new SVN/Trac Project. 5173-0ubuntu0.10.04.1. We have 1 guest online. Welcome to the Frontpage. Welcome to the Frontpage. Thursday, 12 October 2006 12:00. You've found the large memory server! There are many utilities available on this server for use by WSU individuals including:. Sequence analysis programs: blast, blat, phrap/phred/consed, RepeatMasker, tandem repeat finder and more.
Microbial Bioinformatics Group, SKMML, SJTU
Microbial Bioinformatics Group, SKMML, SJTU. Dec-2016, Seminar, Phage lysis: do we have the hole story now. Oct-27-2016, Seminar, Histidine kinase: receptor of β-lactam antibiotics in Gram negative bacteria. Oct-8-2016, Seminar, Systematic Bioinformatic Collection of Vaccines and Pathogen Virulence Factors. Oct 2015, SJTU-software BASE received a gold medal in iGEM. Jul-24, Seminar, From Microorganisms: Drug Delivery, Nanotechnology and Cancer Therapy. Jun-2015, Seminar on AMR and Drug Development. Jul-2...
Welcome to Bioinfo Online - BioInfo-Online
Definitions of Fields Related to Bioinformatics. Welcome to Bioinfo Online. Welcome to www.bioinfo-online.net, your source for bioinformatics and computational biology news and online resources. We welcome you to visit the site and register to submit news, articles and interesting links. Registration is free. Have a look at the video to know What is COMPUTATIONAL BIOLOGY? Applying bioinformatics in biological research. Denture – A Beneficial Substitute to your Persistent Dental Problems.
U900 Institut Curie - INSERM/Mines ParisTech "Bioinformatics and Computational Systems Biology of Cancer"
U900 Institut Curie - INSERM/Mines ParisTech. Bioinformatics and Computational Systems Biology of Cancer". The web site of the U900 has been relocated. Please access the following sites for information about U900:. General description and information about U900. The activities of the computational systems biology of cancer group in U900. Software developed by the U900 platform and research groups at Institut Curie (as of 2011). Web site of U900 Bioinformatics platform (internal access only).
DBT Centre for Bioinformatics Presidency University, Kolkata
Seminars, Training and Workshops. WORKSHOP ON DEC 2007. WORKSHOP ON MAR 2009. SEMINAR ON DEC 2009. WORKSHOP ON SEP 2010. WORKSHOP ON MAR 2011. American Society of Gene and Cell Therapy. Shanghai Institutes for Biological Sciences. The IEEE Computer Society. Bioinformatics Centre, Presidency University. Kolkata. Terms of Use.
