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The Taylor Lab at Johns Hopkins University

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. We are a computational biology lab in the Biology Department. At Johns Hopkins University. With research interests in bioinformatics, computational genomics, and data intensive science. Genomics of gene regulation:. Particularly long-range enhancers. More recently, we have been focusing on understanding the determinants of 3D genome organization. And its role in gene regulation. Genome-wide comparative an...

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The Taylor Lab at Johns Hopkins University | bioinformagic.org Reviews
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Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. We are a computational biology lab in the Biology Department. At Johns Hopkins University. With research interests in bioinformatics, computational genomics, and data intensive science. Genomics of gene regulation:. Particularly long-range enhancers. More recently, we have been focusing on understanding the determinants of 3D genome organization. And its role in gene regulation. Genome-wide comparative an...
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The Taylor Lab at Johns Hopkins University | bioinformagic.org Reviews

https://bioinformagic.org

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. We are a computational biology lab in the Biology Department. At Johns Hopkins University. With research interests in bioinformatics, computational genomics, and data intensive science. Genomics of gene regulation:. Particularly long-range enhancers. More recently, we have been focusing on understanding the determinants of 3D genome organization. And its role in gene regulation. Genome-wide comparative an...

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1

Welcome Enis Afgan to the lab

http://www.bioinformagic.org/news/2014-07-01-welcome-enis-afgan-lab

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. Enis Afgan, cloud and distributed computing expert, had joined the lab as an Associate Research Scientist as of July 2014. Taylor Lab, Department of Biology, 3400 N Charles St, Mudd Hall 144, Baltimore MD, 21218.

2

Publications

http://www.bioinformagic.org/publications

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. Goonasekera N, Lonie A, Taylor J. CloudBridge a Simple Cross-Cloud Python Library. July 2016; :1-6. Forer L, Afgan E. Weissensteiner H, Davidovic D, Specht G, Kronenberg F, Schoenherr S. Cloudflow - enabling faster biomedical pipelines with MapReduce and Spark. Scalable Computing: Practice and Experience (SCPE). June 2016; 17. Beek M, Blankenberg D, Bouvier D, Čech M, Chilton J, Clements D. May 2016; 44.

3

News

http://www.bioinformagic.org/news

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. Two articles published at MIPRO 2015. Capturing work on multi-cloud support for Galaxy on the Cloud. And on expanding the adoption of Big Data in bioinformatics. Posted by Enis Afgan on May 25th 2015. Genome-wide comparative analysis reveals human-mouse regulatory landscape and evolution. Our comprehensive analysis of exaptation of regulatory elements is now published in BMC Genomics. Moving from Emory to...

4

Two articles at Supercomputing 2014

http://www.bioinformagic.org/news/2014-11-13-two-articles-supercomputing-2014

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. 9th Gateway Computing Environments Workshop. The paper Galaxy Cluster to Cloud- Genomics at Scale. Describes the spectacular success of the Galaxy application and presents a blueprint for the next step in terms of the computational infrastructure support: a federated execution model of the application to accommodate the increasing demand.

5

Open pipelines for integrated tumor genome profiles reveal differences between pancreatic cancer tumors and cell lines

http://www.bioinformagic.org/publications/2015-03-01-open-pipelines-for-integrated-tumor-genome-profiles

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. Open pipelines for integrated tumor genome profiles reveal differences between pancreatic cancer tumors and cell lines. El-Rayes BF, Maithel SK, Khoury HJ, Taylor J. March 2015; 4. Taylor Lab, Department of Biology, 3400 N Charles St, Mudd Hall 144, Baltimore MD, 21218.

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The Taylor Lab at Johns Hopkins University

Krieger School of Arts and Sciences. Computational Biology and Genomics at Johns Hopkins University. We are a computational biology lab in the Biology Department. At Johns Hopkins University. With research interests in bioinformatics, computational genomics, and data intensive science. Genomics of gene regulation:. Particularly long-range enhancers. More recently, we have been focusing on understanding the determinants of 3D genome organization. And its role in gene regulation. Genome-wide comparative an...

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