BIOINFORMATICS - AN INTRODUCTION Bioinformatics is the combination of biology and information technology. It is a branch of science which deals with the computer-based analysis of large biological data sets . The term bioinformatics first came into use in 1990’s and was originally synonymous with the management and analysis of DNA, RNA and protein sequence…
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BIOINFORMATICS - AN INTRODUCTION Bioinformatics is the combination of biology and information technology. It is a branch of science which deals with the computer-based analysis of large biological data sets . The term bioinformatics first came into use in 1990’s and was originally synonymous with the management and analysis of DNA, RNA and protein sequence…
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KEGGConverter: Tool for modelling Metabolic Networks | Biointelligence
https://biointelligence.wordpress.com/2009/11/12/keggconverter
November 12, 2009. KEGGConverter: Tool for modelling Metabolic Networks. 8212; Biointelligence: Education,Training & Consultancy Services @ 7:47 am. The Kyoto Encyclopedia of Genes and Genomes. The KEGG Pathway database is a valuable collection of metabolic pathway maps. Nevertheless, the production of simulation capable metabolic networks from KEGG Pathway data is a challenging complicated work, regardless the already developed tools for this scope. Originally used for illustration purposes, KEG...A pro...
Dealing with sparse data in predicting outcomes of HIV combination therapies | Biointelligence
https://biointelligence.wordpress.com/2010/08/18/dealing-with-sparse-data-in-predicting-outcomes-of-hiv-combination-therapies
August 18, 2010. Dealing with sparse data in predicting outcomes of HIV combination therapies. 8212; Biointelligence: Education,Training & Consultancy Services @ 6:26 am. Availability: Code of the efficient logistic regression is available from http:/ www.mpi-inf.mpg.de/%. Leave a Comment ». Feed for comments on this post. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). Uarr; Grab this Headline Animator. Follow &ldqu...
Database of human Protein-DNA Interactions – hPDI | Biointelligence
https://biointelligence.wordpress.com/2010/01/13/database-of-human-protein-dna-interactions-hpdi
January 13, 2010. Database of human Protein-DNA Interactions – hPDI. 8212; Biointelligence: Education,Training & Consultancy Services @ 6:05 am. The characterization of the protein-DNA interactions usually requires three levels of analysis:. Determination of the nucleotide sequence of the protein-binding region and the identification of sequence changes that confer a mutated phenotype. Analysis of specific interactions in protein-target sequence fragment co-crystals. 2 Comments ». Comment by WP Themes.
Bridges: a tool for identifying local similarities in long sequences | Biointelligence
https://biointelligence.wordpress.com/2010/08/16/bridges-a-tool-for-identifying-local-similarities-in-long-sequences
August 16, 2010. Bridges: a tool for identifying local similarities in long sequences. 8212; Biointelligence: Education,Training & Consultancy Services @ 11:52 am. Bridges is a heuristic search tool that uses short word matches to rapidly identify local similarities between sequences. It consists of three stages: filtering input sequences, identifying local similarities and post-processing local similarities. As input sequence data are released from memory after the filtering stage, genome-scale ...Add t...
METAL: fast and efficient meta-analysis of genomewide association scans | Biointelligence
https://biointelligence.wordpress.com/2010/08/19/metal-fast-and-efficient-meta-analysis-of-genomewide-association-scans
August 19, 2010. METAL: fast and efficient meta-analysis of genomewide association scans. 8212; Biointelligence: Education,Training & Consultancy Services @ 5:29 am. Availability and implementation: METAL, including source code, documentation, examples, and executables, is available at http:/ www.sph.umich.edu/csg/abecasis/metal/. Leave a Comment ». Feed for comments on this post. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Bridges: a tool ...
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next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: Direct detection of DNA methylation during single-molecule, real-time sequencing
http://next-gen-biomatix.blogspot.com/2010/06/direct-detection-of-dna-methylation.html
Bioinformatics for the next-generation of DNA sequencing technologies. Wednesday, June 2, 2010. Direct detection of DNA methylation during single-molecule, real-time sequencing. Direct detection of DNA methylation during single-molecule, real-time sequencing. Real-time sequencing tries to observe the single DNA molecule in "real-time", observing kinetic information of the polymerase/enzyme used to incorporate nucleotides. What does this mean? Subscribe to: Post Comments (Atom). If you have a paper or top...
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: A survey of sequence alignment algorithms for next-generation sequencing
http://next-gen-biomatix.blogspot.com/2010/05/survey-of-sequence-alignment-algorithms.html
Bioinformatics for the next-generation of DNA sequencing technologies. Thursday, May 13, 2010. A survey of sequence alignment algorithms for next-generation sequencing. A survey of sequence alignment algorithms for next-generation sequencing. There are also brief discussions of color space read, long reads, bisulfite-treated reads, spliced reads, re-alignment, and a general overview of popular alignment software. Anyhow, it is a good review so check it out. Subscribe to: Post Comments (Atom).
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: Detection and characterization of novel sequence insertions using paired-end next-generation sequencing
http://next-gen-biomatix.blogspot.com/2010/05/detection-and-characterization-of-novel.html
Bioinformatics for the next-generation of DNA sequencing technologies. Wednesday, May 12, 2010. Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. This paper presents a novel pipeline, called NovelSeq. Sequences are missing from the reference. This method would not help solve the potential problem I am thinking about. Reads (OEA). These paired-...
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: 5/30/10 - 6/6/10
http://next-gen-biomatix.blogspot.com/2010_05_30_archive.html
Bioinformatics for the next-generation of DNA sequencing technologies. Wednesday, June 2, 2010. Direct detection of DNA methylation during single-molecule, real-time sequencing. Direct detection of DNA methylation during single-molecule, real-time sequencing. Real-time sequencing tries to observe the single DNA molecule in "real-time", observing kinetic information of the polymerase/enzyme used to incorporate nucleotides. What does this mean? Subscribe to: Posts (Atom). Pathogens: Genes and Genomes.
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: The case for cloud computing in genome informatics
http://next-gen-biomatix.blogspot.com/2010/05/case-for-cloud-computing-in-genome.html
Bioinformatics for the next-generation of DNA sequencing technologies. Tuesday, May 11, 2010. The case for cloud computing in genome informatics. The case for cloud computing in genome informatics. I will discuss some of my criticisms and ideas on the topic related to author's points. The second solution is to use a tried-and-true technology: Bittorrent. Bittorrent is great, although somewhat frowned upon. Already have bittorrent trackers for bio-datasets. Subscribe to: Post Comments (Atom). Transcript a...
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: 4/11/10 - 4/18/10
http://next-gen-biomatix.blogspot.com/2010_04_11_archive.html
Bioinformatics for the next-generation of DNA sequencing technologies. Thursday, April 15, 2010. High quality SNP calling using Illumina data at shallow coverage. High quality SNP calling using Illumina data at shallow coverage. There are two steps, alignment then SNP calling. Technique is a unique and novel technique among short read aligners. I'll let you read the original paper. Wednesday, April 14, 2010. Here's a plug for SeqAnswers.com. It is great site for beginner and expert NGS users and develope...
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: 5/9/10 - 5/16/10
http://next-gen-biomatix.blogspot.com/2010_05_09_archive.html
Bioinformatics for the next-generation of DNA sequencing technologies. Thursday, May 13, 2010. A survey of sequence alignment algorithms for next-generation sequencing. A survey of sequence alignment algorithms for next-generation sequencing. There are also brief discussions of color space read, long reads, bisulfite-treated reads, spliced reads, re-alignment, and a general overview of popular alignment software. Anyhow, it is a good review so check it out. Wednesday, May 12, 2010. One caveat of this met...
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: Journal/Author Name Estimator
http://next-gen-biomatix.blogspot.com/2010/06/journalauthor-name-estimator.html
Bioinformatics for the next-generation of DNA sequencing technologies. Thursday, June 17, 2010. Subscribe to: Post Comments (Atom). What sequencing technology do you use? Biointelligence - The Bioinformatics Hub. Flags and Lollipops - Bioinformatics Blog. My Weblog on Bioinformatics, Genome Science, Next Generation Sequencing. Pathogens: Genes and Genomes. If you have a paper or topic you want me to comment on, please do not hesitate to post a suggestion in the comments section.
next-gen-biomatix.blogspot.com
Next-Generation Bioinformatics: 6/13/10 - 6/20/10
http://next-gen-biomatix.blogspot.com/2010_06_13_archive.html
Bioinformatics for the next-generation of DNA sequencing technologies. Thursday, June 17, 2010. Subscribe to: Posts (Atom). What sequencing technology do you use? Biointelligence - The Bioinformatics Hub. Flags and Lollipops - Bioinformatics Blog. My Weblog on Bioinformatics, Genome Science, Next Generation Sequencing. Pathogens: Genes and Genomes. If you have a paper or topic you want me to comment on, please do not hesitate to post a suggestion in the comments section.
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The Biointelligence Explosion
Preprint of paper appearing in the Springer volume:. A scientific and philosophical assessment. (2013). Eden, A, Sørake, J., Moor, JH., Steinhart, E., eds. Berlin: Springer. Also MS Word. How recursively self-improving organic robots will modify their own. Source code and bootstrap our way to full-spectrum superintelligence. Edward O. Wilson. Consilience, The Unity of Knowledge. New York Review of Books. July 19, 2007). 1 The Fate of the Germline. Only a handful of genes separate Homo sapiens. Of "design...
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Biointelligence | Education,Training & Consultancy Services
BIOINFORMATICS – AN INTRODUCTION. Bioinformatics is the combination of biology and information technology. It is a branch of science which deals with the computer-based analysis of large biological data sets . To provide another definition:. The aims of bioinformatics are three-fold:. Bioinformatics organizes data in a way that allows researchers to access existing information and to submit new entries as they are produced. The second aim is to develop tools and resources that aid in the analysis of data.
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The Scientific Solution for Lasting. Please Pardon Our Dust. Our new website is set to launch April 2010. The keys to good health. Your body is Unique. We honor this complexity with wellness programs that educate,. Empower and reach beyond traditional programs. Our programs are designed to:. The unique needs of the individual. The source or sources of imbalance. What works and what doesn't. A system for measuring and achieving goals. All of our programs can be customized to. Give YOU the tools.
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