biophotonicsblog.org

The Biophotonics Blog | News and ideas from the world of biomedical optics

News and ideas from the world of biomedical optics. Collimated ultrasound from an optical fibre. October 22, 2016. Why do animals have differently shaped pupils? September 17, 2016. They think they have the answer. Banks, Martin S., et al. “ Why do animal eyes have pupils of different shapes? 8221; Science advances 1.7 (2015): e1500391 ↩. Absorption spectroscopy in newborn baby lungs. May 21, 2016. No benefit to structured illumination microscopy for scattering imaging. September 25, 2015. August 29, 2015.

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Michael Hughes

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News and ideas from the world of biomedical optics. Collimated ultrasound from an optical fibre. October 22, 2016. Why do animals have differently shaped pupils? September 17, 2016. They think they have the answer. Banks, Martin S., et al. “ Why do animal eyes have pupils of different shapes? 8221; Science advances 1.7 (2015): e1500391 ↩. Absorption spectroscopy in newborn baby lungs. May 21, 2016. No benefit to structured illumination microscopy for scattering imaging. September 25, 2015. August 29, 2015.

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1 journals

2 conferences

3 web links

4 the biophotonics blog

5 categories

6 endomicroscopy

7 microscopy

8 fluorescence

9 non imaging

10 written by

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The Biophotonics Blog | News and ideas from the world of biomedical optics | biophotonicsblog.org Reviews

https://biophotonicsblog.org

News and ideas from the world of biomedical optics. Collimated ultrasound from an optical fibre. October 22, 2016. Why do animals have differently shaped pupils? September 17, 2016. They think they have the answer. Banks, Martin S., et al. “ Why do animal eyes have pupils of different shapes? 8221; Science advances 1.7 (2015): e1500391 ↩. Absorption spectroscopy in newborn baby lungs. May 21, 2016. No benefit to structured illumination microscopy for scattering imaging. September 25, 2015. August 29, 2015.

INTERNAL PAGES

biophotonicsblog.org

1

phase | The Biophotonics Blog

http://www.biophotonicsblog.org/tag/phase

News and ideas from the world of biomedical optics. Posts with the tag: phase. Imaging through multi-mode fibres using model-based calibration. August 29, 2015. In the last few years, several papers have looked at how it might be possible to use a multimode fibre as an ultra-narrow endoscope (see this post. Tomáš Čižmár and colleagues from the University of Dundee have suggested a possible solution to this problem. Deep Tissue Imaging by Collective Accumulation of Single-Scatterers. April 20, 2015.

2

OCT | The Biophotonics Blog

http://www.biophotonicsblog.org/tag/optical-coherence-tomography

News and ideas from the world of biomedical optics. Posts with the tag: OCT. Deep Tissue Imaging by Collective Accumulation of Single-Scatterers. April 20, 2015. OCT Integrated into Robotic Opthalmic Forceps. April 8, 2015. Coherence Gated Doppler Blood Flow Sensor. May 5, 2013. Researchers at the University of Maryland. April 23, 2013. A team from Massachusetts General Hospital (MGH). Motion Compensated Handheld OCT. November 1, 2012. Several ways of generating a simple optical coherence tomography (OCT...

3

Fluorescence | The Biophotonics Blog

http://www.biophotonicsblog.org/category/fluorescence-imaging

News and ideas from the world of biomedical optics. Posts related to: Fluorescence. High Speed Multi-photon PLIM. January 27, 2013. Has devised a way. To acquire parallel excitation PLIM images which are free from cross-talk. Combined Fluorescence and White Light Laparoscopy. November 8, 2012. The details in the open access journal Biomedical Optics Express. Their suggested application is to help identify nerves during surgery, but the technique could easily be used for a range of purposes. May 21, 2016.

4

Endomicroscopy | The Biophotonics Blog

http://www.biophotonicsblog.org/category/endomicroscopy

News and ideas from the world of biomedical optics. Posts related to: Endomicroscopy. Imaging through multi-mode fibres using model-based calibration. August 29, 2015. In the last few years, several papers have looked at how it might be possible to use a multimode fibre as an ultra-narrow endoscope (see this post. Tomáš Čižmár and colleagues from the University of Dundee have suggested a possible solution to this problem. April 23, 2013. A team from Massachusetts General Hospital (MGH). April 12, 2013.

5

coherence | The Biophotonics Blog

http://www.biophotonicsblog.org/tag/coherence

News and ideas from the world of biomedical optics. Posts with the tag: coherence. Deep Tissue Imaging by Collective Accumulation of Single-Scatterers. April 20, 2015. September 17, 2012. Absorption spectroscopy in newborn baby lungs. May 21, 2016. No benefit to structured illumination microscopy for scattering imaging. September 25, 2015. Imaging through multi-mode fibres using model-based calibration. August 29, 2015. Combined Fluorescence and White Light Laparoscopy. November 8, 2012. August 29, 2015.

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mike-hughes.org

Software | Mike Hughes

http://www.mike-hughes.org/software

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Dynalog Analysis Package for Matlab/Octave. A set of Matlab/ Octave. Flatness and Symmetry (ImageJ). Flatness and Symmetry (IQWorks). An analysis tree for IQWorks. Proudly powered by WordPress. Theme: Writr by WordPress.com.

mike-hughes.org

Quanitative X-Ray Image Quality Analysis | Mike Hughes

http://www.mike-hughes.org/x-ray-image-quality-analysis

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Quanitative X-Ray Image Quality Analysis. This project is now complete and the project report. Contrast Detail Phantom Study. As an Excel 97/03 spreadsheet if you would like to use it for your own study. The images are all in DICOM format and can be ...

mike-hughes.org

Flatness, Deviation and Symmetry for IQWorks | Mike Hughes

http://www.mike-hughes.org/software/flatness-deviation-and-symmetry-for-iqworks

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Flatness, Deviation and Symmetry for IQWorks. An analysis tree for IQWorks. For full details please see the user notes PDF document. Please note that this tree is for educational use only and not for clinical applications. Download the analysis tree.

mike-hughes.org

Endomicroscopy Research | Mike Hughes

http://www.mike-hughes.org/endomicroscopy/endomicroscopy.html

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. My current research is focused on endomicroscopy. A technique that allows us to image human tissue. At a cellular level in. I am part of a team working on an EPSRC funded project. Led by Prof Guang-Zhong Yang. Which aims to develop technological impr...

mike-hughes.org

Full Publication List | Mike Hughes

http://www.mike-hughes.org/full-publication-list

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. More details on selected first-author journal papers are available here. G-ZYang, “. Line-scanning fiber bundle endomicroscopy with a virtual detector slit,. 8221; Biomedical Optics Express (Accepted for publication). [ PDF. 14 S Zuo, M. Hughes.

mike-hughes.org

Flatness, Deviation and Symmetry Macro for ImageJ | Mike Hughes

http://www.mike-hughes.org/flatness-deviation-and-symmetry-macro-for-imagej

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Flatness, Deviation and Symmetry Macro for ImageJ. A macro for ImageJ. For full details please see the user notes PDF document. Please note that this macro is for educational use only and not for clinical applications. Download the user notes.

mike-hughes.org

OCT for Art & Archaeology | Mike Hughes

http://www.mike-hughes.org/oct/octforart.html

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. OCT for Art & Archaeology. While working towards my PhD Thesis. At the University of Kent. And in collaboration with the British Museum. And Nottingham Trent University. And my supervisor was Prof Adrian Podoleanu. Optical Coherence Tomography (OCT).

mike-hughes.org

Quanitative X-Ray Image Quality Analysis | Mike Hughes

http://www.mike-hughes.org/medphys/quantIQ.html

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Quanitative X-Ray Image Quality Analysis. This project is now complete and the project report. Contrast Detail Phantom Study. As an Excel 97/03 spreadsheet if you would like to use it for your own study. The images are all in DICOM format and can be ...

mike-hughes.org

Software | Mike Hughes

http://www.mike-hughes.org/software.html

Postdoc in Biophotonics ORCID: 0000-0001-5301-2492. OCT for Art & Archaeology. Quanitative X-Ray Image Quality Analysis. Dynalog File Analysis for Matlab/Octave. Flatness, Deviation and Symmetry for IQWorks. Flatness, Deviation and Symmetry Macro for ImageJ. Dynalog Analysis Package for Matlab/Octave. A set of Matlab/ Octave. Flatness and Symmetry (ImageJ). Flatness and Symmetry (IQWorks). An analysis tree for IQWorks. Proudly powered by WordPress. Theme: Writr by WordPress.com.

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biophotonicsblog.org

The Biophotonics Blog | News and ideas from the world of biomedical optics

News and ideas from the world of biomedical optics. Collimated ultrasound from an optical fibre. October 22, 2016. Why do animals have differently shaped pupils? September 17, 2016. They think they have the answer. Banks, Martin S., et al. “ Why do animal eyes have pupils of different shapes? 8221; Science advances 1.7 (2015): e1500391 ↩. Absorption spectroscopy in newborn baby lungs. May 21, 2016. No benefit to structured illumination microscopy for scattering imaging. September 25, 2015. August 29, 2015.

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