stothard.afns.ualberta.ca
Stothard Research Group
http://stothard.afns.ualberta.ca/public_html/links.html
Integrative Genomics Viewer (IGV). Microbial Ecology and Metagenomics. Gene Association and QTL Mapping. Red Hat Linux manuals. Victoria, British Columbia. London, United Kingdom. Seoul, South Korea. University of Alberta (Google Maps). University of Alberta (PDF). Edmonton International Airport (Google Maps). Victoria, BC (Google Maps). Valid XHTML 1.0 Strict. Last updated: July 18, 2016.
biotag.wordpress.com
BioRuby | bioTAG
https://biotag.wordpress.com/2006/06/27/bioruby
June 27, 2006. Four months ago BioRuby. 100 has been released. You can download the tar.gz file here. You can view changelog list. BioRuby is one of the newest bioinformatic programming languages and this project aims to implement an integrated environment for bioinformatics with a Ruby. Language library and with a powerful interactive shell. A first BioRuby on-line tutorial can be found here. A comprensive BioRuby shell documentation is also here. Leave a Reply Cancel reply. Enter your comment here.
biotag.wordpress.com
June | 2006 | bioTAG
https://biotag.wordpress.com/2006/06
June 29, 2006. Bioinformatic Sequence Markup Language ( BSML. Is an extensible markup language ( XML. Derived standard that “encodes biological sequence information and includes graphical representations of biologically meaningful objects such as sequences, genes, electrophoresis gels, and multiple alignments”. A detailed BSML overwiev is available here. Whereas the FAQ page is here. The last BSML DTD release ( 3.1 ), the BSML reference manual and tutorial are available here. June 29, 2006. Biobar also h...
albase.bumc.bu.edu
Amyloidosis AL Database: about
http://albase.bumc.bu.edu/aldb/home/about
Public Version. Log in. Amyloid Light Chain Database. For general information about the project, visit the Welcome. AL-Base is written entirely in Ruby, and uses the BioRuby package to simplify sequence alignment and analysis. The creators of the database would like to thank the following people:. David Seldin, Principal Investigator;. Kip Bodi, for designing and programming this application;. Maurya Eberhard, for creative input;. Tatiana Prokaeva, and Brian Spencer, for AL patient LC sequence generation;.
enbug.tdiary.net
enbug diary(2003-10)
http://enbug.tdiary.net/200310.html
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rubygems.org
bio | RubyGems.org | your community gem host
https://rubygems.org/gems/bio
BioRuby is a library for bioinformatics (biology information science). July 1, 2015. May 24, 2013. August 21, 2012. August 26, 2011. October 21, 2010. Show all versions (14 total). Total downloads 121,175. For this version 11,460. Required Ruby Version: = 0. Supported by Ruby Central. Supported by Ruby Together. Optimized by New Relic. Gems served by Fastly. Tested by Travis CI.
biogems.info
biogems.info - gems for bioinformatics
http://www.biogems.info/rubygems.html
The future is bright for Ruby in bioinformatics! Full-stack web application framework. Francis Cianfrocca, Aman Gupta. Actor-based concurrent object framework for Ruby. Tony Arcieri, Donovan Keme. State machines for attributes. The mechanize library is used for automating interaction. Eric Hodel, Aaron Patterson, Mike Dalessio et al. Opinionated tool for creating and managing Rubygem projects. Fred Mitchell, Josh Nichols, Yusuke Murata. A feature-rich, easy-to-use plain text table formatter. Slim rails s...
news.open-bio.org
BioRuby 1.3.1 released | O|B|F News
https://news.open-bio.org/news/category/obf-projects/bioruby
O B F News. Open Source Bioinformatics news. Biopython 1.51 released. Indexing sequence files with Biopython →. BioRuby 1.3.1 released. September 2, 2009. We are pleased to announce the release of BioRuby. 131 This new release fixes many bugs existed in 1.3.0. Here is a brief summary of changes. Refactoring of BioSQL support. Bio: PubMed bug fixes. Bio: NCBI: REST bug fixes. Bio: GCG: Msf bug fixes. Bio: Fasta: Report bug fixes and added support for multiple query sequences. Bio: Sim4: Report bug fixes.