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The OME Blog · Because metadata is worth a thousand pictures

OME 2015. CC by 3.0. Because metadata is worth a thousand pictures. We are in the process of getting rid of submodules and separating our code into smaller repositories. Why? And why should developers and users care? The OME development workflow has been following a single, integrated approach for the last couple of years. This means that all components of the OME stack, including OMERO. Are versioned globally and released simultaneously. The only notable exception to this rule is the OME Data Model.

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The OME Blog · Because metadata is worth a thousand pictures | blog.openmicroscopy.org Reviews

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OME 2015. CC by 3.0. Because metadata is worth a thousand pictures. We are in the process of getting rid of submodules and separating our code into smaller repositories. Why? And why should developers and users care? The OME development workflow has been following a single, integrated approach for the last couple of years. This means that all components of the OME stack, including OMERO. Are versioned globally and released simultaneously. The only notable exception to this rule is the OME Data Model.

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1 blog home

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3 data model

4 community

5 future plans

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The OME Blog · Because metadata is worth a thousand pictures | blog.openmicroscopy.org Reviews

https://blog.openmicroscopy.org

OME 2015. CC by 3.0. Because metadata is worth a thousand pictures. We are in the process of getting rid of submodules and separating our code into smaller repositories. Why? And why should developers and users care? The OME development workflow has been following a single, integrated approach for the last couple of years. This means that all components of the OME stack, including OMERO. Are versioned globally and released simultaneously. The only notable exception to this rule is the OME Data Model.

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blog.openmicroscopy.org

1

The Joy of File Formats · The OME Blog

http://blog.openmicroscopy.org/file-formats/2014/10/16/file-formats

The Joy of File Formats - The OME Blog. OME 2016. CC by 3.0. Because metadata is worth a thousand pictures. The Joy of File Formats. Thus, this Blog, and our first topic, File Formats. Image data and metadata. A digital image is written to disk in a. Data (sometimes referred to as the binary data) and the. What’s a file format? Data standards and lossy data storage. So why isn’t there a single standard for image files? Goldberg et al., 2005. Millard et al., 2011. But in practice, we have found that eithe...

2

The OME Approach to a Common Interface · The OME Blog

http://blog.openmicroscopy.org/file-formats/data-model/2014/10/23/common-interface

The OME Approach to a Common Interface - The OME Blog. OME 2016. CC by 3.0. Because metadata is worth a thousand pictures. The OME Approach to a Common Interface. In this entry, we discuss the technical foundation for Bio-Formats and how it provides a single metadata description that is both well-defined and extensible. The OME Data Model. For each element of an imaging system, it provides a definition, and, critically, a specific statement of the relationship of that element to others, e.g. nume...Propo...

3

On being a Partner or “Send Us The Data” · The OME Blog

http://blog.openmicroscopy.org/file-formats/community/2014/11/14/partnership

On being a Partner or Send Us The Data - The OME Blog. OME 2016. CC by 3.0. Because metadata is worth a thousand pictures. On being a Partner or Send Us The Data. Is a Java library, available under an open source license ( GPL version 2. It plugs into many other software tools. Including ImageJ, Matlab, KNIME, and CellProfiler. The success of the Bio-Formats project is heartening, but what really differentiates it is the way its development process links in with the community. By no means is this reposit...

4

The OME Blog · Because metadata is worth a thousand pictures

http://blog.openmicroscopy.org/page2

Home - The OME Blog. OME 2016. CC by 3.0. Because metadata is worth a thousand pictures. OME 2016 Users Meeting. For those of you who couldn’t make it to Dundee for OME 2016, or maybe just didn’t get to all the sessions you wanted to, we have a range of content on our downloads site notes, slides and even movie versions of workshop presentations available to browse from downloads.openmicroscopy.org/presentations/2016/Users-Meeting/. Or linked via the programme page. Or just drop us an email and we’ll get...

5

Latest Java security issue · The OME Blog

http://blog.openmicroscopy.org/tech-issues/2015/07/21/java-issue

Latest Java security issue - The OME Blog. OME 2016. CC by 3.0. Because metadata is worth a thousand pictures. Latest Java security issue. A user reported last week. That after a Java upgrade, it was no longer possible to connect to the OMERO server using OMERO.insight. Since then we’ve been looking into the issue. A fix is ready as well as a few steps for the future. A recent security vulnerability in Java. Https:/ bugzilla.redhat.com/show bug.cgi? If you are an OMERO user, you should ensure your versio...

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openmicroscopy.org

OME Model and Formats 2016-06 Documentation — OME Model and Formats 2016-06 documentation

http://www.openmicroscopy.org/site/support/ome-model

OME Model and Formats. Job Openings with OME. OME Model and Formats 2016-06 documentation. OME Model and Formats 2016-06 Documentation. Developer tools and guidelines. The Data Model in detail. Enter search terms or a module, class or function name. OME Model and Formats 2016-06 Documentation. This documentation covers the OME Data Model, OME-XML and OME-TIFF. Appeared in Genome Biology. The OME consortium currently provides three major tools capable of working with OME-XML and OME-TIFF:. Current Data Mo...

openmicroscopy.org

Documentation — OME

http://www.openmicroscopy.org/site/support

OME Model and Formats. Job Openings with OME. OMERO documentation home page. About the OMERO Platform. You can also browse or print a PDF version. OMERO API generated documentation is also available. To read online OmeroJava API. OmeroBlitz / Slice API. Or as zipped bundles by OMERO and ICE version from the OMERO downloads site. Bio-Formats documentation home page. You can also browse or print a PDF version. OME Model And Formats Documentation. OME Model, OME-XML and OME-TIFF documentation home page.

openmicroscopy.org

OMERO 5.2.5 Documentation — OMERO 5.2.5 documentation

http://www.openmicroscopy.org/site/support/omero5

OME Model and Formats. Job Openings with OME. OMERO 5.2.5 documentation. About the OMERO Platform. Enter search terms or a module, class or function name. This documentation is for OMERO 5.2. This version is now in maintenance mode and will only be updated in the event of critical bugs or security concerns. OMERO 5.3 is expected before the end of 2016. OMERO 5.2.5 Documentation. The OMERO 5.2.5 documentation is divided into three parts:. About the OMERO Platform. About the OMERO Platform. The source code...

openmicroscopy.org

OME

http://www.openmicroscopy.org/site/accessibility-info

OME Model and Formats. Job Openings with OME. This site uses the Open Source Content Management System Plone. And has been designed to be completely accessible and usable, working in accordance with the Web Content Accessibility Guidelines (. V10) If there is anything on this site — accessibility or validation related — that is not according to the standard, please contact the Site Administration. And not the Plone Team. Mdash; Home Page. Mdash; Skip to content. Mdash; Site Map. Mdash; Contact information.

openmicroscopy.org

The OME Products — OME

http://www.openmicroscopy.org/site/products

OME Model and Formats. Job Openings with OME. View the latest products released by the Open Microscopy Environment. From the microscope to publication, OMERO handles all your images in a central repository. You can view, organize, analyze and share your data from anywhere you have internet access. Work with your images from a desktop app (Windows, Mac or Linux), from the web or from 3rd party software. Bio-Formats, the solution for reading and writing microscopy file formats. The OME-TIFF File Format.

openmicroscopy.org

OME Community — OME

http://www.openmicroscopy.org/site/community

OME Model and Formats. Job Openings with OME. Job Openings with OME. You can contact us for help and advice by using the forums or mailing lists. Using these public feedback options means the whole community can take part and benefit. Allow the whole OME community to share their expertise and offer solutions. We have two mailing lists. For support-related requests and discussions. You can submit a bug report via our QA system. For feedback and support. Report a Security Issue. Developed by our community.

openmicroscopy.org

Minutes — OME

http://www.openmicroscopy.org/site/community/minutes

OME Model and Formats. Job Openings with OME. Job Openings with OME. August 2016 ». Minutes of conference calls and meetings - updated regularly. Minutes of meetings held on Skype and webex. These are currently weekly and cover project management as well as regular presentations focused on aspects of our work. Minutes of face to face meetings. These are normally full day meetings focusing on talking key strategic decisions. Agenda and notes of mini group meetings.

openmicroscopy.org

About OMERO — OME

http://www.openmicroscopy.org/site/products/omero

OME Model and Formats. Job Openings with OME. From the microscope to publication, OMERO handles all your images in a secure central repository. You can view, organize, analyze and share your data from anywhere you have internet access. Work with your images from a desktop app (Windows, Mac or Linux), from the web or from 3rd party software. Over 140 image file formats supported, including all major microscope formats. Using OMERO as an image scientist. Running OMERO for your institution. But realisticall...

openmicroscopy.org

OME

http://www.openmicroscopy.org/site/sitemap

OME Model and Formats. Job Openings with OME. An overview of the available content on this site. Keep the pointer still over an item for a few seconds to get its description. Searcher results, single reference image. Multiple searcher references selected. Searcher results, multiple reference images. Searcher results, single reference image, thumbnail. Multiple searcher references selected, thumbnail. Searcher results, multiple reference images, thumbnail. New User Quick Links. OME Model and Formats.

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OpenMediaVault - The open network attached storage solution

Openmediavault is the next generation network attached storage (NAS) solution based on Debian Linux. It contains services like SSH, (S)FTP, SMB/CIFS, DAAP media server, RSync, BitTorrent client and many more. Thanks to the modular design of the framework it can be enhanced via plugins. Easy system updates via Debian package management. Posted: 3. March 2018. The following changes were made:. Openmediavault 3.0.98. Fix locking issue in SMB recycle bin cleanup and iptables scripts. Scroll back to top.

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Open Merchant Account Ltd - Cross-Platform App Development

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blog.openmicroscopy.org

The OME Blog · Because metadata is worth a thousand pictures

OME 2015. CC by 3.0. Because metadata is worth a thousand pictures. We are in the process of getting rid of submodules and separating our code into smaller repositories. Why? And why should developers and users care? The OME development workflow has been following a single, integrated approach for the last couple of years. This means that all components of the OME stack, including OMERO. Are versioned globally and released simultaneously. The only notable exception to this rule is the OME Data Model.

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