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Rhesus (Macaca mulatta) Genome Browser Gateway

Rhesus ( Macaca mulatta. Jan 2006 (MGSC Merged 1.0/rheMac2). Oct 2010 (BGI CR 1.0/rheMac3). Chr4:29,334,337-29,370,443. Click here to reset. The browser user interface settings to their defaults. Rhesus Genome Browser – rheMac2 assembly (sequences). Photo courtesy of Chuan-Yun Li. Displays all of chromosome 19. Displays the first 100,000 bases of chromosome 19. Displays a region of chr 19 that spans 2000 bases, starting with position 100000. Displays EST with GenBank accession CO582753.

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Rhesus (Macaca mulatta) Genome Browser Gateway | browser.rhesusbase.org Reviews
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Rhesus ( Macaca mulatta. Jan 2006 (MGSC Merged 1.0/rheMac2). Oct 2010 (BGI CR 1.0/rheMac3). Chr4:29,334,337-29,370,443. Click here to reset. The browser user interface settings to their defaults. Rhesus Genome Browser – rheMac2 assembly (sequences). Photo courtesy of Chuan-Yun Li. Displays all of chromosome 19. Displays the first 100,000 bases of chromosome 19. Displays a region of chr 19 that spans 2000 bases, starting with position 100000. Displays EST with GenBank accession CO582753.
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1 genomes
2 genome browser
3 tools
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7 in silico pcr
8 liftover
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Rhesus (Macaca mulatta) Genome Browser Gateway | browser.rhesusbase.org Reviews

https://browser.rhesusbase.org

Rhesus ( Macaca mulatta. Jan 2006 (MGSC Merged 1.0/rheMac2). Oct 2010 (BGI CR 1.0/rheMac3). Chr4:29,334,337-29,370,443. Click here to reset. The browser user interface settings to their defaults. Rhesus Genome Browser – rheMac2 assembly (sequences). Photo courtesy of Chuan-Yun Li. Displays all of chromosome 19. Displays the first 100,000 bases of chromosome 19. Displays a region of chr 19 that spans 2000 bases, starting with position 100000. Displays EST with GenBank accession CO582753.

LINKS TO THIS WEBSITE

rhesusbase.com rhesusbase.com

Secretory Protein

http://www.rhesusbase.com/drugDisc/SP.jsp

Chr1:1-100000 / chr1:1 9999. 4173 human secretory proteins were integrated from SPD. To facilitate drug development. All the proteins were ranked according to the prediction confidence and classified into different functional categories.

rhesusbase.com rhesusbase.com

RhesusBase Score

http://www.rhesusbase.com/RhesusBaseScore.jsp

Chr1:1-100000 / chr1:1 9999. To provide quality assessment of NGS datasets integrated in RhesusBase, the RhesusBase quality score. For mRNA-seq data integrated in RhesusBase, nine parameters were considered in the evaluation and scoring of NGS datasets, including:. Normalized RNA integrity number as an indicator for the quality of RNA samples;. Normalized lengths of RNA-seq reads;. Normalized percentage of high quality sites (the 25th percentile Phred quality score 20) across all bases of the reads;.

rhesusbase.com rhesusbase.com

GPCR

http://www.rhesusbase.com/drugDisc/GPCR.jsp

Chr1:1-100000 / chr1:1 9999. 857 Human GPCR Associated Genes were integrated to facilitate the molecular signal transduction research and drug development. Adenylate cyclase activating polypeptide 1 (pituitary) receptor type I. Adrenoceptor beta 2, surface. Angiotensin II receptor, type 1. Angiotensin II receptor, type 2. Angiotensin II receptor-associated protein. Arginine vasopressin receptor 1A. Arginine vasopressin receptor 1B. Arginine vasopressin receptor 2. Brain-specific angiogenesis inhibitor 1.

rhesusbase.net rhesusbase.net

RhesusBase Score

http://www.rhesusbase.net/RhesusBaseScore.jsp

Chr1:1-100000 / chr1:1 9999. To provide quality assessment of NGS datasets integrated in RhesusBase, the RhesusBase quality score. For mRNA-seq data integrated in RhesusBase, nine parameters were considered in the evaluation and scoring of NGS datasets, including:. Normalized RNA integrity number as an indicator for the quality of RNA samples;. Normalized lengths of RNA-seq reads;. Normalized percentage of high quality sites (the 25th percentile Phred quality score 20) across all bases of the reads;.

rhesusbase.net rhesusbase.net

Secretory Protein

http://www.rhesusbase.net/drugDisc/SP.jsp

Chr1:1-100000 / chr1:1 9999. 4173 human secretory proteins were integrated from SPD. To facilitate drug development. All the proteins were ranked according to the prediction confidence and classified into different functional categories.

rhesusbase.com rhesusbase.com

Gene Page Manual

http://www.rhesusbase.com/help/document/genePage.jsp

Chr1:1-100000 / chr1:1 9999. This document illustrates the help information about RhesusBase Gene Page. Nine functional categories of annotations were integrated and standardized, including Gene Description, Gene/Transcript Structure, Expression Profile, Regulation Mode, Variation and Repeats, Comparative Genomics, Gene Function, Phenotype/Disease Association and Drug Development. We also integrated all related annotations in human and mouse for each gene in rhesus macaque, aiming to maximize the...A fre...

rhesusbase.com rhesusbase.com

RhesusBase

http://www.rhesusbase.com/index.jsp

Chr1:1-100000 / chr1:1 9999. Was thus developed to refine genome-wide macaque gene structures, to integrate macaque functional annotations, and to provide a 'one-stop' knowledgebase for the primate research community. Of the rhesus macaque transcripts were convincingly revised on the basis of 1.2. Billion RNA-Seq reads generated by strand-specific mRNA sequencing in ten macaque tissues (covering 97.4%. Of macaque exons). Functional genomics annotations from 60. Nucleic Acids Res, 2012. An NGS-oriented ge...

rhesusbase.com rhesusbase.com

Cell Adhesion Molecules

http://www.rhesusbase.com/drugDisc/CAM.jsp

Chr1:1-100000 / chr1:1 9999. For cell adhesion molecules was compiled by integrating Gene Ontology annotations, domain structure information, and keywords query against NCBI Entrez Gene annotations. Totally 496 human genes were identified, including genes in cadherin, immunoglobulin/FNIII, integrin, neurexin, neuroligan, as well as catenin families. An ontology. For cell adhesion molecules (CAMO) was developed and shown below. Please click ' ' to expand, or click '-' to collapse.

rhesusbase.org rhesusbase.org

Secretory Protein

http://www.rhesusbase.org/drugDisc/SP.jsp

Chr1:1-100000 / chr1:1 9999. 4173 human secretory proteins were integrated from SPD. To facilitate drug development. All the proteins were ranked according to the prediction confidence and classified into different functional categories.

rhesusbase.net rhesusbase.net

RhesusBase News

http://www.rhesusbase.net/news/rbNewsList.jsp

Chr1:1-100000 / chr1:1 9999. 2016-03-21] RhesusBase PopGateway was featured by Molecular Biology and Evolution. RhesusBase Population Genetics Gateway. An interface to access comprehensive population genetics parameters for each gene in rhesus macaque was featured by Molecular Biology and Evolution. Full text are available:. Joseph Caspermeyer. First Genome-Wide Mutational Map of Macaques a Boon for Evolutionary Studies. Molecular Biology and Evolution. 2016-03-01] Molecular Biology and Evolution. 2013-1...

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Rhesus (Macaca mulatta) Genome Browser Gateway

Rhesus ( Macaca mulatta. Jan 2006 (MGSC Merged 1.0/rheMac2). Oct 2010 (BGI CR 1.0/rheMac3). Chr4:29,334,337-29,370,443. Click here to reset. The browser user interface settings to their defaults. Rhesus Genome Browser – rheMac2 assembly (sequences). Photo courtesy of Chuan-Yun Li. Displays all of chromosome 19. Displays the first 100,000 bases of chromosome 19. Displays a region of chr 19 that spans 2000 bases, starting with position 100000. Displays EST with GenBank accession CO582753.

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