carpbase.org

CarpBase:A DataBase Of Common Carp Genome Project

Common carp ( Cyprinus carpio. July 1st, 2014: CarpBase was officially released to public. Please send any comments and enquiries to genomics@cafs.ac.cn. June 7-11th, 2014: Prof. Xiaowen Sun and Dr. Peng Xu participated the World Aquaculture Conference 2014 at Adelaide, Australia and Dr. Peng Xu presented progresses of genomics and genetics study on Chinese common carp. March 20, 2013: Prof. Xiaowen Sun and Dr. Peng Xu, Jiongtang Li, Jian Xu participated the first PAG Asia conference at Singapore.

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Centre for Applied Aquatic Genomics,Chinese Academy of Fishery Sciences

Xu Peng

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Centre for Applied Aquatic Genomics,Chinese Academy of Fishery Sciences

Xu Peng

150 Yon●●●●●●●d South

Be●●ng , Beijing, 100141

CN

86.01●●●●●97522

86.01●●●●●70893

xu●●●●●●@gmail.com

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Centre for Applied Aquatic Genomics,Chinese Academy of Fishery Sciences

Xu Peng

150 Yon●●●●●●●d South

Be●●ng , Beijing, 100141

CN

86.01●●●●●97522

86.01●●●●●70893

xu●●●●●●@gmail.com

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CarpBase:A DataBase Of Common Carp Genome Project | carpbase.org Reviews

<META> DESCRIPTION

Common carp ( Cyprinus carpio. July 1st, 2014: CarpBase was officially released to public. Please send any comments and enquiries to genomics@cafs.ac.cn. June 7-11th, 2014: Prof. Xiaowen Sun and Dr. Peng Xu participated the World Aquaculture Conference 2014 at Adelaide, Australia and Dr. Peng Xu presented progresses of genomics and genetics study on Chinese common carp. March 20, 2013: Prof. Xiaowen Sun and Dr. Peng Xu, Jiongtang Li, Jian Xu participated the first PAG Asia conference at Singapore.

<META> KEYWORDS

1 project overview

2 news

3 publications

4 maps

5 genetic maps

6 physical maps

7 qtl by population

8 qtl by trait

9 synteny

10 gene synteny

CONTENT

Page content here

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project overview,news,publications,maps,genetic maps,physical maps,qtl by population,qtl by trait,synteny,gene synteny,carp medaka,carp danio,synteny search,resequencing,annotation,non coding rna,mirna,pathway,interpro,gene ontology,transcription factor

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CarpBase:A DataBase Of Common Carp Genome Project | carpbase.org Reviews

https://carpbase.org

Common carp ( Cyprinus carpio. July 1st, 2014: CarpBase was officially released to public. Please send any comments and enquiries to genomics@cafs.ac.cn. June 7-11th, 2014: Prof. Xiaowen Sun and Dr. Peng Xu participated the World Aquaculture Conference 2014 at Adelaide, Australia and Dr. Peng Xu presented progresses of genomics and genetics study on Chinese common carp. March 20, 2013: Prof. Xiaowen Sun and Dr. Peng Xu, Jiongtang Li, Jian Xu participated the first PAG Asia conference at Singapore.

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carpbase.org

1

CarpBase:A DataBase Of Common Carp Genome Project

http://www.carpbase.org/physical.php

Address: No.150 Qingta,Yongding Rd,Beijing,P,R,China Zip:100141 Tel: 86-10 68673938 Fax: 86-10 68676685 Email: genomics@cafs.ac.cn.

2

CarpBase:A DataBase Of Common Carp Genome Project

http://www.carpbase.org/genetic.php

Common Carp Genome Viewer. Both the name and pos of each marker is avalible to be clicked, and the marker will be shown in GBrowse. Address: No.150 Qingta,Yongding Rd,Beijing,P,R,China Zip:100141 Tel: 86-10 68673938 Fax: 86-10 68676685 Email: genomics@cafs.ac.cn.

3

CarpBase:A DataBase Of Common Carp Genome Project

http://www.carpbase.org/ssr.php

Eg 000001058, LG35. Eg (ATATA)12, (TG)8. Address: No.150 Qingta,Yongding Rd,Beijing,P,R,China Zip:100141 Tel: 86-10 68673938 Fax: 86-10 68676685 Email: genomics@cafs.ac.cn.

4

CarpBase:A DataBase Of Common Carp Genome Project

http://www.carpbase.org/orthgroup.php

Representative peptide sequences from carp (release 1), Danio (Zv9), Gasterosteu s (BROADS1), Oryzias (MEDAKA1) and Takifugu (FUGU4) were used for identification of putative orthologous groups using OrthoMCL with default parameters (Li et al ., 2003). Orthologous Group Table View. While total group count: 18671. Address: No.150 Qingta,Yongding Rd,Beijing,P,R,China Zip:100141 Tel: 86-10 68673938 Fax: 86-10 68676685 Email: genomics@cafs.ac.cn.

5

CarpBase:A DataBase Of Common Carp Genome Project

http://www.carpbase.org/publication.php

Common Carp Genome Project Publications. Zhao L, Zhang Y, Ji P, Zhang X, Zhao Z, Hou G, et al. A dense genetic linkage map for common carp and its integration with a BAC-based physical map. PLoS One. 2013;8(5):e63928. Zhang Y, Wang S, Li J, Zhang X, Jiang L, Xu P, et al. Primary genome scan for complex body shape-related traits in the common carp Cyprinus carpio. Journal of fish biology. 2013;82(1):125-40. Zhang X, Zhang Y, Zheng X, Kuang Y, Zhao Z, Zhao L, et al. BMC genomics. 2013;14:604. The complete ...

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CarpBase:A DataBase Of Common Carp Genome Project

Common carp ( Cyprinus carpio. July 1st, 2014: CarpBase was officially released to public. Please send any comments and enquiries to genomics@cafs.ac.cn. June 7-11th, 2014: Prof. Xiaowen Sun and Dr. Peng Xu participated the World Aquaculture Conference 2014 at Adelaide, Australia and Dr. Peng Xu presented progresses of genomics and genetics study on Chinese common carp. March 20, 2013: Prof. Xiaowen Sun and Dr. Peng Xu, Jiongtang Li, Jian Xu participated the first PAG Asia conference at Singapore.

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