dictyexpress.biolab.si
dictyExpressdictyExpress: A dictyostelium discoideum gene expression database with an explorative data analysis web-based interface
http://dictyexpress.biolab.si/
dictyExpress: A dictyostelium discoideum gene expression database with an explorative data analysis web-based interface
http://dictyexpress.biolab.si/
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https://dictyexpress.biolab.si
dictyExpress: A dictyostelium discoideum gene expression database with an explorative data analysis web-based interface
dictyexpress.biolab.si
dictyExpress Documentation
http://dictyexpress.biolab.si/documentation.htm
DictyExpres is a Flash-based web application for retrieval and analysis of gene expression profiles from different D. discoideum. Gene Expression Query: selection of an experiment and a subset of genes. Experiment filtering (strain name, treatment or growth conditions should match all of the entered search terms) and gene name completion are also supported. Clicking on the gene name leads to the corresponding dictyBase. Gene Ontology: results of a term-enrichment analysis in which the selected genes serv...
dictyExpress Support
http://dictyexpress.biolab.si/faq.htm
What do i need to run dictyExpress? A Flash 10 enabled web browser. If your browser has an older version of the player, you should install the newest version of the Flash player. You may use the Flash Version Test. Adobe) to verify your currently installed version. When I first run dictyExpress, the application is asking me to allow local storage on my computer. Why? This question is actually issued by Flash informing you that some of the information (essentially, the list of Dictyostelium.
dictyExpress Data
http://dictyexpress.biolab.si/data.htm
DictyExpress provides access to the Dictyostelium. Expression data published by the Functional Genomics Project at Baylor College of Medicine. The expressions were observed at over 20 different Dictyostelium. Strains at various stages of development. Microarray Data ( D. discoideum. The table below shows the number of chips (replications) for each strain at specific timepoint (hours). RNA-Seq data were collected from D. discoideum. Raw data is also available from this server.
dictyExpress Screencasts
http://dictyexpress.biolab.si/screencasts.psp
Getting started with dictyExpresss. Search for co-expressed genes. Finding genes with specific expression profiles. Overview of dictyExpress components. Experiment and gene selection. Labs @ Baylor College of Medicine and AI Lab.
dictyExpress
http://dictyexpress.biolab.si/index.htm
DictyExpress is an interactive, web-based exploratory data analytics application providing access to over 1,000 Dictyostelium. Gene expression experiments from Baylor College of Medicine. Experiment and gene selection. Experiment and gene selection. Select an experiment and a set of genes. Expression profile with three genes. Expression profile with three genes. Dendrogram and heatmap showing the. Results of hierarchical clustering. Dendrogram and heatmap showing the results of hierarchical clustering.
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dictyExpress
DictyExpress is an interactive, web-based exploratory data analytics application providing access to over 1,000 Dictyostelium. Gene expression experiments from Baylor College of Medicine. Experiment and gene selection. Experiment and gene selection. Select an experiment and a set of genes. Expression profile with three genes. Expression profile with three genes. Dendrogram and heatmap showing the. Results of hierarchical clustering. Dendrogram and heatmap showing the results of hierarchical clustering.
dictyExpress
Analysis of gene expression in Dictyostelium. An interactive, exploratory data analytics web-app that provides access to gene expression experiments in Dictyostelium. By Baylor College of Medicine. Plot and explore RNA-seq gene expressions of D. discoideum. Find clusters of expressed genes and play with Gene Ontology enrichment analysis. Compare gene expression across different strains and explore cell-type specific expressions. Experiment and Gene Selection. Differential Expression - Selection. Or to ad...
Functional Genomics of Dictyostelium at Baylor College of Medicine
Modes of gene expression. The genome of Dictyostelium was sequenced and assembled by an international consortium which included the team from BCM. The results were published in. On May 5, 2005. The high-throughput REMI pipeline generates plasmid reagents appropriate for targeted knockouts of loci. These reagents may be ordered through links in the DictyEnsembl. We have performed an extensive comparison of the proteomes of the first two amoebozoa genomes to be sequenced:. Modes of Gene Expression.
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