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Bishop Theoretical Molecular Modeling Lab - Louisiana Tech University

Bishop's Theoretical Molecular Biology Lab. Rm 231 Biomedical Engineering Center. Ruston, LA 71272.

http://dna.engr.latech.edu/

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Bishop Theoretical Molecular Modeling Lab - Louisiana Tech University | dna.engr.latech.edu Reviews
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Bishop Theoretical Molecular Modeling Lab - Louisiana Tech University | dna.engr.latech.edu Reviews

https://dna.engr.latech.edu

Bishop's Theoretical Molecular Biology Lab. Rm 231 Biomedical Engineering Center. Ruston, LA 71272.

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1

Nucleosome Maker

http://dna.engr.latech.edu/freedna/freedna.php

Simple Models of DNA. Enter a sequence of A's,C's, G's, and T's then click "Go" . If you prefer uploading your DNA sequence (in lieu of typing it in) click the button below. Try one of our samples here:.

2

Bishop Lab Home Page

http://dna.engr.latech.edu/ManyJobs

Current Version available via SVN. Svn co svn:/ franklin.ccs.tulane.edu/ManyJobs ./ManyJobs. For more information contact Hideki Fujioka. Fuji at tulane.edu. Please acknowledge ManyJobs with a statement similar to the following. Download ManyJobsV041.tar.gz. Save it as ManyJobs.tar.gz. Unpack it with tar -zxvf ManyJobs.tar.gz. See the README.txt in the ManyJobs directory. Also see ManyJobs Manual Page. Download ManyJobsV04.tar.gz. What's new in Ver.0.4. New Key Entries in DataBase.

3

Bishop Lab Home Page

http://dna.engr.latech.edu/vdna

VDNA: Virtual DNA for VMD. Current Version 2.2. Save it as vdna.tcl. Then source it on VMD's. Command line (source vdna.tcl). VDNA: The virtual DNA plug-in for VMD". Bioinformatics 2009 25(23), 3187-3188; doi:10.1093/bioinformatics/btp566. Other nifty tools and resources from our lab. Web tools for making sequence dependent models of DNA (free DNA). And for Interactive Chromatin Modeling (ICM). Send your favorite mathematical expressions to me and I'll start an image collection.

4

ICM

http://dna.engr.latech.edu/icm-du/index.php

ICM I see 'em. Nucleic Acids Res. 2010 38:W254-W261. Bishop Lab Home Page. This option uses the default sequence. GenBank #V01175: the GR MMTV LTR. This option allows for sequence input. Please insert your sequence:. Type or cut-and-paste sequence here. Try one of our samples below or search PubMed. A Scipioni, S. Pisano, C. Anselmi, M. Savino, P. De Santis, 2004, Biophys. Chem. v.107, p.7. This option allows a sequence selection to be uploaded. Choose a DNA sequence to upload:. MD-B = Lankas 2003. XRAYP...

5

T. C. Bishop Lab Home Page

http://dna.engr.latech.edu/subindex.html

Tom Bishop's Theoretical Molecular Biology Lab. Thomas C. Bishop, Ph.D. Bishop at latech.edu. Tips and Tricks for Tech. Other Affiliations and Collaborations. Louisiana Optical Network Initiative (LONI). Louisiana Alliance for Simulation-Guided Materials Applications (LA-SiGMA). Ascona B-DNA Consortium (ABC). Flexible and Extendable Scientific Undergraduate Experience (FEScUE). Global Federated File System (GFFS). Founding Member Center for Computational Sciences. Graduate Student Positions Available.

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