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Edwards Lab

Friday, 7 August 2015. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks. The latest paper from the lab (featuring work from Emily Olirin. 8217;s summer project) is now out at F1000Research. We’ve not gone down the post-publication peer review route before, so it will be interesting to see how that goes, but it made sense in this case as it’s part of a special Cytoscape Apps channel. Rest assured that it has undergone technical review, just not. Date: 1...

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Edwards Lab | edwardslab.blogspot.com Reviews
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Friday, 7 August 2015. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks. The latest paper from the lab (featuring work from Emily Olirin. 8217;s summer project) is now out at F1000Research. We’ve not gone down the post-publication peer review route before, so it will be interesting to see how that goes, but it made sense in this case as it’s part of a special Cytoscape Apps channel. Rest assured that it has undergone technical review, just not. Date: 1...
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Edwards Lab | edwardslab.blogspot.com Reviews

https://edwardslab.blogspot.com

Friday, 7 August 2015. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks. The latest paper from the lab (featuring work from Emily Olirin. 8217;s summer project) is now out at F1000Research. We’ve not gone down the post-publication peer review route before, so it will be interesting to see how that goes, but it made sense in this case as it’s part of a special Cytoscape Apps channel. Rest assured that it has undergone technical review, just not. Date: 1...

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Edwards Lab: Metabotropic glutamate receptors: modulators of context-dependent feeding behaviour in C. elegans

http://www.edwardslab.blogspot.com/2015/04/metabotropic-glutamate-receptors.html

Friday, 17 April 2015. Metabotropic glutamate receptors: modulators of context-dependent feeding behaviour in C. elegans. Dillon J, Franks CJ, Murray C, Edwards RJ, Calahorro F, Ishihara T, Katsura I, Holden-Dye L, O’Connor V (in press). Metabotropic glutamate receptors: modulators of context-dependent feeding behaviour in C. elegans. Apr 13. pii: jbc.M114.606608. Subscribe to: Post Comments (Atom). Metabotropic glutamate receptors: modulators of co. Åsa Pérez-Bercoff (Postdoctoral research associate.

2

Edwards Lab: New SLiMSuite release and GitHub site

http://www.edwardslab.blogspot.com/2015/06/new-slimsuite-release-and-github-site.html

Monday, 1 June 2015. New SLiMSuite release and GitHub site. Is now available. This is the first release in the new. Repository at https:/ github.com/slimsuite/SLiMSuite. Is also available, containing the same code. Once unpacked, it should be possible to pull down additional updates with. Subscribe to: Post Comments (Atom). The content of this site does not represent the official position of the University of New South Wales. Please report any errors that you spot! Research snapshot: June 2015. The Schoo...

3

Edwards Lab: Publications

http://www.edwardslab.blogspot.com/p/publications.html

OPEN IN: [ PubMed. Note that Web of Science tends to lag behind pubmed and recent publications may not be found via the above links. Please make sure that you or your library have the correct subscriptions before downloading PDFs from this site. Watson-Lazowski A, Lin Y, Miglietta F, Edwards RJ. Chapman MA and Taylor G (2016):. Plant adaptation or acclimation to rising CO. Insight from first multigenerational RNA-Seq transcriptome. Adv access. doi: 10.1111/gcb.13322 [ Glob Chang Biol. 1316-1326. [ GBE.

4

Edwards Lab: New EdwardsLab Homepage

http://www.edwardslab.blogspot.com/2015/05/new-edwardslab-homepage.html

Saturday, 30 May 2015. The EdwardsLab has a new homepage:. Http:/ www.slimsuite.unsw.edu.au. This blog will remain as the primary source of news and information but the new page gives a fresh landing page and some additional links to resources:. The old pages should now redirect but please point any out of date pages and/or link rot that you come across. Subscribe to: Post Comments (Atom). Honours and undergrad research opportunities (dead. ABACBS 2015: Register now! AGTA15 Speaker Presentations online.

5

Edwards Lab: SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks

http://www.edwardslab.blogspot.com/2015/08/slimscape-3x-cytoscape-3-app-for.html

Friday, 7 August 2015. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks. The latest paper from the lab (featuring work from Emily Olirin. 8217;s summer project) is now out at F1000Research. We’ve not gone down the post-publication peer review route before, so it will be interesting to see how that goes, but it made sense in this case as it’s part of a special Cytoscape Apps channel. Rest assured that it has undergone technical review, just not. Richard...

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orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: Classification

http://orcacronyms.blogspot.com/p/acronym-classification-acronyms-in-orca.html

The Organisation of Really Contrived Acronyms. Acronyms in ORCA are classified in three. Bottom of the heap is the. Acronym. This acronym may still be fairly contrived but the result has no real bearing on what the acronymn stands for. ORCA itself is an example of this, at least until it is discovered that Killer Whales are prolific generators of acronyms (in which case it would become. Respectable middle ground is held by the. Acronym. This was contrived in an. 8220;Ad hoc”. The daddy of ORCA acronyms,.

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: Acronyms

http://orcacronyms.blogspot.com/p/acronyms.html

The Organisation of Really Contrived Acronyms. ADAN - prediction of protein-protein interAction of moDular domAiNs. ACHOO - Autosomal dominant Compelling Helio-Ophthalmic Outburst. ARENA - Australian Renewable ENergy Agency. ASSET - Accelerated Segment Switch in Exons to alter Targeting. BADGER - Bay Area Digital GEo-Resource. BADGER - British Aristocrats Disregard Government Expert’s Research. BADGERS - Building Analysis Datasets and Gathering Experience Returns for Security. FACE - Free-Air CO. FATE - ...

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: FUBAR - Fast Unconstrained Bayesian AppRoximation

http://orcacronyms.blogspot.com/2015/04/fubar-fast-unconstrained-bayesian.html

The Organisation of Really Contrived Acronyms. Wednesday, 15 April 2015. FUBAR - Fast Unconstrained Bayesian AppRoximation. From the authors that brought you BUSTED (Branch-site Unrestricted Statistical Test for Episodic Diversification). Oximation. (Doubly from the authors in this case, as the first author gave the tip-off.). Despite it’s intranym status, FUBAR gets an extra geek hat-tip for being a homonym of “ foo bar. 8221; (Although in looking that up, I came across the original FUBAR. BUSTED - Bran...

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: May 2014

http://orcacronyms.blogspot.com/2014_05_01_archive.html

The Organisation of Really Contrived Acronyms. Wednesday, 21 May 2014. ARENA - Australian Renewable ENergy Agency. An independent agency established by the Australian Government on 1 July 2012. We have two objectives: to improve the competitiveness of renewable energy technologies, and to increase the supply of renewable energy in Australia. Unfortunately, ARENA was one of the losers from the recent Australian budget and might not be around much longer. Wednesday, 7 May 2014. And RNA ( R. REACH - Registr...

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: June 2014

http://orcacronyms.blogspot.com/2014_06_01_archive.html

The Organisation of Really Contrived Acronyms. Monday, 16 June 2014. MFSPSSMpred - Masked, Filtered and Smoothed Position-Specific Scoring Matrix-based predictor. Today’s post is a bit odd, as it is an anti-ORCA acronym. There is a reason why contrived acronyms exist, and I think that MFSPSSMpred. Is a prime example. The acronym itself is. MFSPSSMpred does have one thing going for it, though, and that’s Google-friendliness. Providing you spell it right, that is! Subscribe to: Posts (Atom). ACHOO - A utos...

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: September 2014

http://orcacronyms.blogspot.com/2014_09_01_archive.html

The Organisation of Really Contrived Acronyms. Monday, 22 September 2014. MAGIC - the Meta-Analyses of Glucose and Insulin-related traits Consortium. The final human genetics consortium. For now) is MAGIC. Onsortium, another co-author of the DIAGRAM consortium. This is probably the most contrived of the lot, in that it failed to use all its words but did include “Consortium”. At the same time, being part of MAGIC has a certain appeal above CHARGE. Sunday, 21 September 2014. Number three is the GIANT.

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: DOLPHIN

http://orcacronyms.blogspot.com/p/dolphin.html

The Organisation of Really Contrived Acronyms. DOLPHIN was the ORCA Newsletter. Or, if you prefer,. Ewsletter. Oh yes. The original plan was to distribute news of ORCA, including new submissions of note, via DOLPHIN. Now you can just subscribe to this blog using the link to the left. In a very real sense, ORCA is a DOLPHIN. Subscribe to: Posts (Atom). IRENE - Image, Reconstruct, Erase Noise, Etc. GARFIELD - Genome Annotation Resource FIELDs (a cat genome browser). BLAST - Basic Local Alignment Search Tool.

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: MUSIC - MUltiScale enrIchment Calling

http://orcacronyms.blogspot.com/2014/10/music-multiscale-enrichment-calling.html

The Organisation of Really Contrived Acronyms. Tuesday, 14 October 2014. MUSIC - MUltiScale enrIchment Calling. Over on the ACGT blog. Keith Bradnam has another JABBA Award. And a nice new JABBA logo):. I'm not sure what the connection between MUSIC and ChIP-Seq is but the authors seemed pretty determined. His post is actually a twofer, as it also draws attention to an equally contrived an unfathomable intranym:. Read more at Keith’s blog. Subscribe to: Post Comments (Atom). This paper popped up in my Pu...

orcacronyms.blogspot.com orcacronyms.blogspot.com

The Organisation of Really Contrived Acronyms: December 2014

http://orcacronyms.blogspot.com/2014_12_01_archive.html

The Organisation of Really Contrived Acronyms. Saturday, 20 December 2014. SANTA - Spatial Analysis of NeTwork Associations. A festive bioinformatics acronym today: SANTA. Ssociations. The authors don't make a big deal of the acronym in the paper but it seemed contrived enough for a Christmas ORCA entry. Ref: Cornish AJ and Markowetz F (2014) SANTA: Quantifying the Functional Content of Molecular Networks. PLoS Comput Biol 10(9): e1003808. Subscribe to: Posts (Atom). This month’s Nature Audio file ...

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wonderbar

Thursday, May 10, 2007. Friday, May 4, 2007. Thursday, May 3, 2007. Browser tools and add-ons. Activities #1 I went into mozzella firefox which I had already installed,I went to tools and add-ons I went to stumble upon I listed 5 catagories that I would be interested in and then I added this site to my favorites and bookmark them, I searched a few and moved on. I then went to morris bookmarkklets page,. Tuesday, May 1, 2007. Tuesday, April 24, 2007. Monday, April 23, 2007. Learning with a friend.

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Edwards Lab

Friday, 7 August 2015. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks. The latest paper from the lab (featuring work from Emily Olirin. 8217;s summer project) is now out at F1000Research. We’ve not gone down the post-publication peer review route before, so it will be interesting to see how that goes, but it made sense in this case as it’s part of a special Cytoscape Apps channel. Rest assured that it has undergone technical review, just not. Date: 1...

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Edwards Lab - Georgetown University Medical Center

Skip to Extra Content. The Edwards lab conducts research in various aspects of computational biology and bioinformatics, particularly proteomics and mass spectrometry informatics and DNA and protein based signatures for pathogen detection. Research in molecular biology has been revolutionized by the advent of high-throughput experimental protocols that conduct hundreds or thousands of simple experiments in parallel. By itself, each simple experiment means little, but the combined results of all of th...

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Edwards Lab | University of Sheffield

Dr David Edwards, PI. Ileana Acosta, PhD. Joli Borah, PhD. Pamela González del Pliego, PhD. Matthew Hethcoat, PhD. Manoela Schiavon Machado, PhD. Mike Massam, PhD. Rebecca Senior, PhD. Felix Lim, PhD. Mohammad Nazrin bin Abdul Malik, PhD. Simone Messina, PhD. Eleanor Warren-Thomas, PhD. Cindy Cosset, PhD. Carlos Aquila Chan Miranda, MRes. Katie Cook, MBiolSci. Patrick Cannon, MBiolSci. Research in the Edwards Lab focuses at the nexus of biodiversity conservation, tropical land-use and climate change, and...

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Edwards Lab – Neurotransmitter Release

The Synaptic Basis of Behavior. December 14, 2012. The quantal release of neurotransmitter underlies information processing by the brain, but the basic mechanisms responsible for this mode of signaling remain poorly understood. What controls the tonic release of neurotransmitter, either by spontaneous vesicle fusion or by non-vesicular efflux across the plasma membrane? What determines the amount of neurotransmitter stored per synaptic vesicle, a poorly understood determinant of quantal size? In addition...

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Edwards Label | Digital Flexo Litho Printing | California Illinois