enigma.lbl.gov
All Resources Archives - ENIGMA
http://enigma.lbl.gov/category/resources
Ecosystems and Networks Integrated with Genes and Molecular Assemblies. General Microbial and Community Data and Tools. Metabolomic Data and Tools. Regulation Data and Tools. New Team Member Registration. Bacterial Communities As Precise Biosensors Of Environmental Damage. Read More ». Desulfovibrio – Methanococcus Co-Evolution. Krona Website →. Read More ». Barcoded Transposon Mutant Library. Barcoded transposon mutant library →. Read More ». Read More ». SLIME: Supervised Learning in Microbial Ecology.
baliga.systemsbiology.net
Baliga Lab Personnel | Baliga Lab at Institute for Systems Biology
http://baliga.systemsbiology.net/drupal/members
Skip to main content. All e-mail addresses are @systemsbiology.org. University of Massachusetts at Amherst. MSc, Marine Biotechnology. Goa University, India. David J. Reiss. Anne W. Thompson. Adrián López García de Lomana. Assistant Professor, NYU. Email: bonneau(at)cs.nyu.edu. Marc T. Facciotti. Assistant Professor, UCDavis. Assistant Professor, Duke. Senior Scientist, NIHS, Japan. Email: masumura(at)nihs.go.jp. Assistant Professor, University of Sao Paulo. Univ of Arizona- School of Medicine 2009.
baliga.systemsbiology.net
Resources for exploring EGRIN for oxidative stress | Baliga Lab at Institute for Systems Biology
http://baliga.systemsbiology.net/drupal/content/egrin-oxidative-stress
Skip to main content. Resources for exploring EGRIN for oxidative stress. Oxidative stress (OS) is a condition reached when certain environmental stresses or genetic defects cause the production of ROS to exceed the management capacity. EGRIN. Is a multi-tiered systems scale program for OS management that was constructed using network inference algorithms cMonkey and Inferelator. You can find details of how this was done in the following manuscript:. Can be accessed in 5 formats:. Data Matrix Viewer (DMV).
ictbiomed.net
solutions | International Consortium for Technology in Biomedicine
http://www.ictbiomed.net/taxonomy/term/9
Skip to main content. International Consortium for Technology in Biomedicine. ROSETTA Protein Modelling Pipeline. Protein Modelling Pipeline is a high throughput protein structure prediction platform delivered as a grid-based service. Is a framework for exchanging data between independently developed software tools and databases to enable interactive exploration of systems biology data. Is a system for long-term preservation of source data (e.g. master files), primarily focused on textual, graphi...Is an...
ictbiomed.net
| International Consortium for Technology in Biomedicine
http://www.ictbiomed.net/solutions
Skip to main content. International Consortium for Technology in Biomedicine. Tools developed and provided by ICTBioMed. ICTBioMed consortium groups partners with a long record of delivering informatics-based solutions for life sciences research. See tools provided by partner:. See tools by category:. See partners' capability matrix. Anvaya : A Workflow Environment for High Throughput Comparative Genomics. Is an automated pipeline for high-throughout comparative genomics, developed with a focus on the de...
simkes2012.wordpress.com
simkesUGM2012 | Catatan Mahasiswa SIMKES UGM 2012 | Page 2
https://simkes2012.wordpress.com/page/2
Catatan Mahasiswa SIMKES UGM 2012. April 10, 2014. List of open-source bioinformatics software. From : http:/ en.wikipedia.org/wiki/List of open source bioinformatics software. A language-neutral bioinformatics toolkit built using the Microsoft 4.0 .NET Framework to help developers, researchers, and scientists. GNU General Public License. Framework for data analysis. Tool for designing and executing phylogenetic workflows. General Public Licence (GPL). Suite of automated docking tools. 50,90,100), RefSeq.
ictbiomed.net
Chalmers | International Consortium for Technology in Biomedicine
http://www.ictbiomed.net/taxonomy/term/14
Skip to main content. International Consortium for Technology in Biomedicine. Is a framework for exchanging data between independently developed software tools and databases to enable interactive exploration of systems biology data. Is a web-based resource for analysis of high-throughput data, together with methods for flux analysis (fluxomics) and integration of transcriptome data exploiting the capabilites of metabolic networks described in genome scale models.
baliga.systemsbiology.net
Halophiles | Baliga Lab at Institute for Systems Biology
http://baliga.systemsbiology.net/drupal/content/halophiles
Skip to main content. Research in our lab is focused on two halophilic archaeal - Halobacterium salinarum NRC-1. And Haloarcula marismortui ATCC 43049. To facilitate these studies we have determined the complete genome sequences for both of these organisms and have developed an array of genome scale strategies tailored to analyzing their biology. Using these powerful tools we are applying systems approaches. There are several reasons that influenced our choice of halophilic archaea as our model system(s)...
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