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Genepop on the Web

GENEPOP is a population genetics software package originally developed by. Michel Raymond ( Raymond@isem.univ-montp2.fr. Francois Rousset ( Rousset@isem.univ-montp2.fr. At the Laboratiore de Genetique et Environment, Montpellier, France. The latest version of Genepop (4.6) is now available from http:/ kimura.univ-montp2.fr/ rousset/Genepop.htm. G -DNO MODULES -o Genepop GenepopS.cpp -O3'. The web version currently implements Genepop 4.2, not the latest version. Status of Web Version. Upgraded to Genepop ...

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Genepop on the Web | genepop.curtin.edu.au Reviews

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GENEPOP is a population genetics software package originally developed by. Michel Raymond ( Raymond@isem.univ-montp2.fr. Francois Rousset ( Rousset@isem.univ-montp2.fr. At the Laboratiore de Genetique et Environment, Montpellier, France. The latest version of Genepop (4.6) is now available from http:/ kimura.univ-montp2.fr/ rousset/Genepop.htm. G -DNO MODULES -o Genepop GenepopS.cpp -O3'. The web version currently implements Genepop 4.2, not the latest version. Status of Web Version. Upgraded to Genepop ...

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6 3 population differentiation

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Genepop on the Web | genepop.curtin.edu.au Reviews

https://genepop.curtin.edu.au

GENEPOP is a population genetics software package originally developed by. Michel Raymond ( Raymond@isem.univ-montp2.fr. Francois Rousset ( Rousset@isem.univ-montp2.fr. At the Laboratiore de Genetique et Environment, Montpellier, France. The latest version of Genepop (4.6) is now available from http:/ kimura.univ-montp2.fr/ rousset/Genepop.htm. G -DNO MODULES -o Genepop GenepopS.cpp -O3'. The web version currently implements Genepop 4.2, not the latest version. Status of Web Version. Upgraded to Genepop ...

INTERNAL PAGES

genepop.curtin.edu.au

1

Genepop References

http://genepop.curtin.edu.au/bibliography.html

Anderson, M. J., 2001. Permutation tests for univariate or multivariate analysis of variance and regression. Can J Fish. Aquatic Sci. Barton, N. H. and Slatkin, M., 1986. A quasi-equilibrium theory of the distribution of rare alleles in a subdivided population. Black, IV, W. C. and Krafsur, E. S., 1985. A FORTRAN program for the calculation and analysis of two-locus linkage disequilibrium coeffcients. Theor Appl. Genet. J Computational Graphical Stat. Ann Hum. Genetics. Chapman and Hall, London. Felsenst...

2

GenePop Input/Output Help

http://genepop.curtin.edu.au/help_input.html

The data file for GenePop(WWW) and LinkDos(WWW) can be uploaded, or can be typed or pasted into the Text Window provided. If uploaded, the datafile MUST be in plain text format. The Input File Format for Genepop(WWW) and LinkDos(WWW) :. First line : Any characters. Use this line to store information about you data. Second line : the name of the first locus. Third line : the name of the second locus (if needed). Alternatively, separate loci with commas. Or a comma space) on the same line. Genotypes for ea...

3

Appendix 2: Multilocus F-statistics

http://genepop.curtin.edu.au/Appendix1.htm

Excerpt from the genepop documentation section 6, author Francis Rousset. This section is only intended as a quick reference guide. The primary literature should be consulted for further information about the methods implemented in Genepop. When apparent null homozygotes are observed, one may wonder whether these are truly null homozygotes, or whether some technical failure independent of genotype. 3 Algorithms for exact tests. 4 Accuracy of P values estimated by the Markov chain algorithms.

4

Appendix 2: Multilocus F-statistics

http://genepop.curtin.edu.au/Appendix2.htm

Appendix 2: Multilocus F-statistics. As it appears in the DOS version 3.4 documentation written by Francois Rousset). May be defined as. S are probability of identity in state of pairs of genes either within ( Q. Individuals within subpopulations. F. May likewise be defined as. Is the probability of identity in state of pairs of genes between subpopulations. It can be estimated as. A function of the size of each sample. With several loci, such an analysis is performed for each locus i. Estimates for the ...

5

Appendix 2: Multilocus F-statistics

http://genepop.curtin.edu.au/Appendix3.htm

Excerpts from the DOS version 4.0 documentation written by Francois Rousset). 1 Microsatellite allele sizes, R. Following Slatkin (1995), statistics based on allele size have been widely used. The parameters r. And their estimators are defined by replacing any. By the expected square difference in allele size between the genes compared (Rousset, 1996) in all formulas above, and any. 2 Robertson and Hill's estimator of F. Last Modified on April 14, 2010 by Eleanor Morgan.

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