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Invitation | GeneGrid
https://genegrid.genomatix.com/grid/invite
Get invited to GeneGrid. Thanks for your interest in GeneGrid. Submit your info below and we'll get in touch with you. About GeneGrid or discover other Genomatix solutions.
genegrid.genomatix.com
Home | GeneGrid
https://genegrid.genomatix.com/grid/home
From many to meaningful. Discover relevant variants in genomic data. Genomic variants like SNPs or small InDels are of major interest to biologists and clinicians alike. Identification of the relevant variants within a genome is crucial for the understanding of molecular mechanisms and diagnostics of rare or common diseases. GeneGrid enables you to reduce the millions of variants generated by today's NGS experiments to the few or even the single relevant one(s) with a few clicks. Moreover GeneGrid uses t...
genegrid.genomatix.com
User Manual | Documentation | GeneGrid
https://genegrid.genomatix.com/grid/doc/help/user-manual
GeneGrid enables you to quickly interpret SNVs and small indel variants from human sequencing data. Variants from targeted panels, exome and whole genome sequencing are annotated using a variety of annotation sources. You can filter the list for those annotated variants in the samples individually, perform trio analyses or compare case and control sets using multiple samples. GeneGrid is designed to support the latest web browsers. We support the current versions of Chrome. And Internet Explorer 11.
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Portal für Wissenschaftler, Kliniken, Krankenkassen. Im Auftrag von deepsouth. Kunst im öffentlichen Raum. Uccello - gut zu hören.
genegrid.genomatix.com
Data Sources | Variant Annotation | GeneGrid
https://genegrid.genomatix.com/grid/sample/source
This page lists the currently used sources for the annotation process. ElDorado is the Genomatix genome annotation. Information from a variety of different sources together with data generated by Genomatix’ proprietary algorithms is used to set up a database of quality checked data. Ensembl Human Genome Annotation, Release 86, European Bioinformatics Institute (EBI). NCBI Homo sapiens Annotation (NCBI RefSeq), Release 108, National Center for Biotechnology Information (NCBI). This compilation of gene lis...
genegrid.genomatix.com
Tutorial | Documentation | GeneGrid
https://genegrid.genomatix.com/grid/doc/help/tutorial
GeneGrid enables you to quickly reduce millions of variants to a few or even the single relevant one(s). All known and novel SNVs and InDels in your results can be annotated using our extensive annotation. This tutorial describes step by step how to annotate and filter the list for those variants of interest to you. You will perform a. And easily identify the most likely disease causing variants. This tutorial should take less than. That likely causes Leber congenital amaurosis (LCA). Mother (M1/ , M2/ ).
genegrid.genomatix.com
Frequently Asked Questions | Documentation | GeneGrid
https://genegrid.genomatix.com/grid/doc/help/faq
Which genomes are supported? Reference genome of homo sapiens for. What variant types are supported? Which input format is supported? The default input is VCF (Variant Call Format). This is the format used by the. And is a standard format that can be also used by other tools and software packages. For details, see Requirements. Which VCF format is supported and what fields and meta-information will be imported? The Version 4.1. And Version 4.2. The read depth per sample (. And the allelic read depths (.
genegrid.genomatix.com
Release Notes | Documentation | GeneGrid
https://genegrid.genomatix.com/grid/doc/help/release-notes
December 14, 2016. Additional subset from ExAC. The allele frequencies from the Exome Aggregation Consortium (ExAC) source are also available as a subset. In addition the highest allele frequency (. In any one population of ExAC set is available as a separate field. For details see Lek et al. 2016. PolyPhen scores are added to the effect prediction evaluation and are based on pre-calculated values from Ensembl. Transcripts for GRCh38 were updated to the Ensembl 86. And NCBI RefSeq Release 108. Values in ...
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Copenhagenomics » Sponsors
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Program & Speakers. Then send a request to info [a] cphx.org and we will be in touch with you as soon as possible with the sponsor kit and prices or read more about it here. Sign up for Updates. Receive news and updates! Douglas G. Scofield. Radboud University Nijmegen Medical Centre. Solving challenges in data analyses.
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