genome.dkfz-heidelberg.de
IntroDKFZ Genomics Proteomics Core Facility
http://genome.dkfz-heidelberg.de/
DKFZ Genomics Proteomics Core Facility
http://genome.dkfz-heidelberg.de/
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Intro | genome.dkfz-heidelberg.de Reviews
https://genome.dkfz-heidelberg.de
DKFZ Genomics Proteomics Core Facility
genome.dkfz-heidelberg.de
Publications
http://genome.dkfz-heidelberg.de/husar/1348.html
Genomics and Proteomics Core Facility. P53-dependent non-coding RNA networks in chronic lymphocytic leukemia. Blume CJ, Hotz-Wagenblatt. A, Hüllein J, Sellner L, Jethwa A, Stolz T, Slabicki M, Lee K, Sharathchandra A, Benner A, Dietrich S, Oakes CC, Dreger P, Te Raa D, Kater AP, Jauch A, Merkel O, Oren M, Hielscher T, Zenz T. 2015 May 14. doi: 10.1038/leu.2015.119.Epub ahead of print,PMID:25971364. Identification of the feline foamy virus Bet domain essential for APOBEC3 counteraction. Spatial Localizati...
Research & Development
http://genome.dkfz-heidelberg.de/husar/1312.html
Genomics and Proteomics Core Facility. SplicingCompass: differential splicing detection using RNA-Seq data. Alternative splicing is central for cellular processes and substantially increases transcriptome and proteome diversity. Aberrant splicing events often have pathological consequences and are associated with various diseases and cancer types. And complementary in silico analyses of the biological data itself. Theoretical and practical coverage achieved by targeted exome enrichment.
Analysis Pipelines
http://genome.dkfz-heidelberg.de/husar/1313.html
Genomics and Proteomics Core Facility. This page contains a list of all pipelines that you can access from W2H. Click on the name of the pipeline to get a more detailed description and some example output. Pipelines are organized in groups:. LINK 1326 - internal-link OnTarget /link. OnTarget evaluates data from next-generation sequencing after subgenomic enrichment. It processes sequence reads and maps them against target regions of the genome. LINK 1323 - internal-link PeakDetector /link. Comparison of ...
Login (external)
http://genome.dkfz-heidelberg.de/husar/1351.html
Genomics and Proteomics Core Facility. W2H for external users. Latest available W2H version: 4.1. Start W2H with your last configuration. Start W2H Simple Mode. Start W2H Advanced Mode. Start W2H via HTTPS with your last configuration. Start W2H Simple Mode via HTTPS. Start W2H Advanced Mode via HTTPS. HUSAR can be accessed via an encrypted internet connection (HTTPS/SSL). All upload and download will be encrypted. Our server certificate was issued by the DKFZ Server CA (Certification Authority).
Husar
http://genome.dkfz-heidelberg.de/husar/hs_husar.html
Genomics and Proteomics Core Facility. HUSAR (Heidelberg Unix Sequence Analysis Resources). The program package contains programs in the following areas:. Data base searching BLAST. Data base searching Other programs. Data base reference searching utilities. Profiles and Hidden Markov Models. Sequence editing and manipulation. Sequence translation and conversion. Gene finding and pattern analysis. RNA analysis and secondary structure. Login to W2H (registration required):. Login for DKFZ users.
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AmaZonia! Exon - Explore the jungle of microarrays results !
http://amazonia.transcriptome.eu/exon.php
Get Started and F.A.Q. Friday, August 19. Welcome to AmaZonia Exon! Recent advances in high density oligonucleotides microarray. Technology have brought solutions for molecular profiling of human samples at an unprecedented resolution at the exon level. We provide a free. Dedicated website, Amazonia Exon! To visualize the expression. Of more than 1 000 000 known and predicted human exons in a collection of adult tissues. How to cite Amazonia Exon! PLoS One. 2010 Feb 1;5(2):e8990. Can be used as a wildcard.
AmaZonia! Exon - Explore the jungle of microarrays results !
http://amazonia.transcriptome.eu/exon
Get Started and F.A.Q. Friday, August 19. Welcome to AmaZonia Exon! Recent advances in high density oligonucleotides microarray. Technology have brought solutions for molecular profiling of human samples at an unprecedented resolution at the exon level. We provide a free. Dedicated website, Amazonia Exon! To visualize the expression. Of more than 1 000 000 known and predicted human exons in a collection of adult tissues. How to cite Amazonia Exon! PLoS One. 2010 Feb 1;5(2):e8990. Can be used as a wildcard.
INFORMATION
http://nvninformatics.blogspot.com/2010/10/make-money.html
Gateway to Bioinformatics and Life science research. Thursday, October 7, 2010. Subscribe to: Post Comments (Atom). Begin BidVertiser code - make money! Baylor College of Medicine HGSC. Bielefeld University Bioinformatics Server. EBI European Bioinformatics Institute. EMBNet - A Quick Guide to Expasy. GenomeNet WWW server Japan. HUSAR Bioinformatics Lab - Biocomputing Services at DKFZ. NCBI US National Center for Biotechnology Information. San Diego Supercomputer Center Biological Projects. Whitehead Ins...
INFORMATION: August 2010
http://nvninformatics.blogspot.com/2010_08_01_archive.html
Gateway to Bioinformatics and Life science research. Saturday, August 28, 2010. Module 3: Motif Discovery. When a sequence motif appears in the exon. The " structural motif. That is a stereotypical element of the overall structure. Of the protein. Nevertheless, motifs need not be associated with a distinctive secondary structure. Sequences are not translated. Into proteins, and nucleic acids. With such motifs need not deviate from the typical shape (e.g. the "B-form" DNA. And motifs within the " junk.
INFORMATION: Module 3: Motif Discovery
http://nvninformatics.blogspot.com/2010/08/module-3-motif-discovery.html
Gateway to Bioinformatics and Life science research. Saturday, August 28, 2010. Module 3: Motif Discovery. When a sequence motif appears in the exon. The " structural motif. That is a stereotypical element of the overall structure. Of the protein. Nevertheless, motifs need not be associated with a distinctive secondary structure. Sequences are not translated. Into proteins, and nucleic acids. With such motifs need not deviate from the typical shape (e.g. the "B-form" DNA. And motifs within the " junk.
INFORMATION: October 2010
http://nvninformatics.blogspot.com/2010_10_01_archive.html
Gateway to Bioinformatics and Life science research. Thursday, October 7, 2010. Subscribe to: Posts (Atom). Begin BidVertiser code - make money! Baylor College of Medicine HGSC. Bielefeld University Bioinformatics Server. EBI European Bioinformatics Institute. EMBNet - A Quick Guide to Expasy. GenomeNet WWW server Japan. HUSAR Bioinformatics Lab - Biocomputing Services at DKFZ. NCBI US National Center for Biotechnology Information. San Diego Supercomputer Center Biological Projects. Whitehead Institute M...
Rosario M. Piro - FU/Charité
http://www.rmpiro.net/index.html
Rosario M. Piro, PhD. Assistant Professor of Bioinformatics. Principle Investigator: Computational Neuropathology and Oncology (CNO) Research Group. Freie Universität Berlin, Germany. Charité-Universitätsmedizin Berlin. Dep of Mathematics and Computer Science. Institute of Medical Genetics. Institute of Computer Science. And Institute of Bioinformatics. Personal website @ FU. Bioinformatics / computational biology. Medical bioinformatics with a primary focus on. PhD in molecular medicine. At University o...
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Genome International Corp.
Hassle free analysis of next-generation sequencing data. Cloud-based analysis of high-throughput data. Powerful data visualization and annotation capabilities. Support for several NGS applications (mRNA-Seq, DNA/Exome Seq, Methylyome-Seq, miRNA-Seq, ChIP-Seq). Largest resource of splicing signals. 3D visualization of domain architecture mapped to exon-intron structures of genes. An integrated database of alternative splicing and transcription events. Dynamic platform to analyze disease causing mutations.
UCSC Genome Browser Home
Reset All User Settings. Interactively visualize genomic data. Rapidly align sequences to the genome. Download data from the Genome Browser database. Get functional effect predictions for variant calls. Combine data sources from the Genome Browser database. Find genes that are similar by expression and other metrics. Genome Browser in a Box (GBiB). Run the Genome Browser on your laptop or server. Rapidly align PCR primer pairs to the genome. Convert genome coordinates between assemblies.
Genome Research
Skip to main page content. Associate Editor Position Available. Top 10 Most Read Articles. Join Us on Facebook. Cold Spring Harbor Molecular Case Studies. Cold Spring Harbor Perspectives in Medicine. Cold Spring Harbor Perspectives in Biology. Cold Spring Harbor Protocols. Cold Spring Harbor Symposia. Books and Other Media. March 27, 2018. GR in the News. E-mail Alerts and RSS Feeds. Enhancer RNA profiling predicts transcription factor activity. Human-specific splicing switch and hepatocellular carcinoma.
Fintech Genome
Intro
Genomics and Proteomics Core Facility. Update of the sRNAMapper pipeline. Ontarget2: quality control for Next-Generation-Sequencing Data after sub-genomic enrichment. GenePanelCoverage: a quality control tool for exome enrichment panels. Bioinformatics (HUSAR, W180) at the German Cancer Research Center. We offer our service in conjunction with other parts of our Core Facility (especially with W190, High-Throughput Sequencing) and with the IT Core Facility (W310) maintaining our HUSAR server. Phone: 49 62...
遺伝子検査 LAMP法 販売 eGenomeOrder(イーゲノムオーダー)
E Genome Order イーゲノムオーダー 事務局. 切り替え作業のため、現行の番号は3/30 金 17:00までとなり、3/30(金)17:00 4/2(月)9:00はFAX受付が停止となりますので、ご了承いただきたくお願い申し上げます。 Emsp; 製品名 感熱ロール紙TF50KS E2C 5巻 箱 製品コード 061901. Emsp; 販売終了日 即日. テラメックス株式会社 http:/ www.teramecs.com/. OptiGene社関連製品 価格改定 値上げ のお知らせ. 税別 1,691,000円. Isothermal Master Mix for GenieIII (200テスト用) [NE5101]. Isothermal Master Mix for GenieIII (400テスト用) [NE5103]. GenieIII Tube Strip (50 strips) [NE5201]. GenieIII Tube Strip (250 strips) [NE5203]. GenieIII Cooling Block [NE5301]. 株式会社ニッポンジーンのL...
Genomics Virtual Lab - GVL Home
Launch your own GVL. Learn with GVL Tutorials. About the GVL Project. A virtual laboratory for genomics research and training. Use our Galaxy servers and genome browser. Get your own private server in the cloud with Galaxy, command-line bioinformatics, RStudio Server and IPython Notebook. Learn genomics methods using our tutorials.
UCSC Genome Browser Home
About the UCSC Genome Bioinformatics Site. Welcome to the UCSC Genome Browser website. This site contains the reference sequence and working draft assemblies for a large collection of genomes. It also provides portals to the ENCODE. We encourage you to explore these sequences with our tools. The Genome Browser. Zooms and scrolls over chromosomes, showing the work of annotators worldwide. The Gene Sorter. Quickly maps your sequence to the genome. The Table Browser. We are pleased to announce the release o...
TATABOX | All you can genomics, bioinformatics and analytics!
All you can genomics, bioinformatics and analytics! All you can genomics, bioinformatics and analytics! TATABOX is home to your data analytics! TATABOX is located in the world's greatest city, Chicago! TATABOX has come around as need for the science and technology to further prosper. Seeing the lack of bioinformatics and analytics, our scientists set down and developed means that would help research . Read more ». Read more ». Read more ». All you can do bioinformatics for a monthly fixed price!
Genomics, Medicine, and Pseudoscience
Genomics, Medicine, and Pseudoscience. Moss Plants and More. The Culture of Chemistry. The View from a Microbiologist. Genomics, Medicine, and Pseudoscience. This is Steven Salzberg's blog on genomics, pseudoscience, medical breakthroughs, higher education, and other topics, including skepticism about unscientific medical practices. Here's where I can say what I really think about abuses and distortions of science, wherever I see them. Here's $142M we'll be wasting on pseudoscience in the new US Budget.
