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GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

Met and Ace. Regulators. Last update: Mar. 1st, 2018. Computational prediction of phosphorylation sites with their cognate protein kinases (PKs) is greatly helpful for further experimental design. Although 10 online predictors were developed, the PK classification and control of false positive rate ( FPR. Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.0. With novel Peptide Selection. Human PKs in hierarchy. This website is lin...

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GPS 3.0 - Kinase-specific Phosphorylation Site Prediction | gps.biocuckoo.org Reviews

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Met and Ace. Regulators. Last update: Mar. 1st, 2018. Computational prediction of phosphorylation sites with their cognate protein kinases (PKs) is greatly helpful for further experimental design. Although 10 online predictors were developed, the PK classification and control of false positive rate ( FPR. Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.0. With novel Peptide Selection. Human PKs in hierarchy. This website is lin...

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GPS 3.0 - Kinase-specific Phosphorylation Site Prediction | gps.biocuckoo.org Reviews

https://gps.biocuckoo.org

Met and Ace. Regulators. Last update: Mar. 1st, 2018. Computational prediction of phosphorylation sites with their cognate protein kinases (PKs) is greatly helpful for further experimental design. Although 10 online predictors were developed, the PK classification and control of false positive rate ( FPR. Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.0. With novel Peptide Selection. Human PKs in hierarchy. This website is lin...

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gps.biocuckoo.org

1

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/citation.php

Last update: Sep. 10th, 2014. For publication of results please cite the following article:. GPS 20, a Tool to Predict Kinase-specific Phosphorylation Sites in Hierarchy. Xinjiao Gao, Changjiang Jin, Longping Wen*, and Xuebiao Yao*. Mol Cell Proteomics. 2008. GPS: a comprehensive www server for phosphorylation sites prediction. Fengfeng Zhou, Minjie Zhu, Kashif Ahmed, Guoliang Chen and Xuebiao Yao*. Nucleic Acids Res. 2005. 33 (suppl 2): W184-W187. Protein Engineering, Design and Selection (2011). 14 Kim...

2

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/userguide.php

Last update: Sep. 10th, 2014. 8251; User Guide:. How to use GPS 3.0 software? You can find the latest version of GPS 3.0 at http:/ gps.biocuckoo.org/download.php. Then download and install the GPS 3.0 software to your computer.Currently, GPS 3.0 is implemented in JAVA and could be installed on a computer with Windows/Linux/Unix/Mac OS . And we also wrote a manual for users which included in the installation package. What's the difference between simple prediction and comprehensive prediction? The value c...

3

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/online.php

Last update: Sep. 10th, 2014. For high-throughput data analysis, please download the Stand-alone Program. The local version is more powerful and has more functions. Prediction with annotations of secondary structure. Please wait a moment, it will take you 10 seconds. Enter sequence(s) in FASTA format. Or, upload file( 1M). Will be automatically removed. You could input. Sequences in FASTA format. You can use the following keyboard shortcuts to select,copy and paste data.

4

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/links.php

Last update: Sep. 10th, 2014. Computational resources of protein phosphorylation :. Last updated: Dec 17, 2014. We apologized that the computational studies without any web links of databases or tools will not be included in this compendium, since it's not easy for experimentalists to use studies directly. We are grateful for users feedback. Please inform Dr. Yu Xue. To add, remove or update one or multiple web links below. 2 Prediction of non-specific or organism-specific phosphorylation sites. PhosphoN...

5

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

http://gps.biocuckoo.org/index.php

Last update: Sep. 10th, 2014. Computational prediction of phosphorylation sites with their cognate protein kinases (PKs) is greatly helpful for further experimental design. Although 10 online predictors were developed, the PK classification and control of false positive rate ( FPR. Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.0. With novel Peptide Selection. Human PKs in hierarchy. This website is linked in ExPASy Proteomics...

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tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/userguide.php

Last update: Oct. 20th, 2014. In DOSS 1.0 database, we tried to make it more powerful and convenient to be used. The online service and local packages were provided. This USAGE is prepared for the online service of the database. The DOSS 1.0 provide the search option and advance options. ( DOSS ID. Please click on the Example button to search C3AR1 in Gene Name field. By clicking on the Submit button, the related doss proteins will be shown. Will be shown by clicking on the Submit button. You can browse ...

tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/index.php

Last update: Oct. 20th, 2014. 8251; GPS-TSP INTRODUCTION:. Tyrosine sulfation is a ubiquitous PTM that predominantly modifies proteins in the secretory pathway ( Bundgaard. Walsh and Jefferis, 2006. And plays an important role in regulating chemotaxis ( Monigatti. Walsh and Jefferis, 2006. Inflammatory response ( Gao. And cell adhesion ( Stone. In animals, the sulfation is catalyzed by two closely related tyrosylprotein sulfotransferases (TPST-1 and TPST-2) ( Monigatti. Walsh and Jefferis, 2006. Experime...

tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/download.php

Last update: Oct. 20th, 2014. GPS-TSP 1.0 Software Download. GPS-TSP 1.0 is ONLY freely available for academic research. And for commercial usage, please contact us. Please download GPS-TSP 1.0 installation package by clicking the link below:. Current Release: GPS-TSP 1.0.0. GPS-TSP 1 0 windows 20141127.exe. Mac OS X Platform. GPS-TSP 1 0 macos 20141127.dmg. GPS-TSP 1 0 unix 20141127.sh. Please read the Manual. 8251; Dataset Download:. British Indian Ocean Territory. Congo, the Democratic Republic of the.

csspalm.biocuckoo.org

CSS-Palm - Palmitoylation Site Prediction

http://csspalm.biocuckoo.org/down.php

Last update: Feb. 27th, 2014. The CSS-Palm is ONLY freely available for academic research. And for commercial usage, please contact us. Please download CSS-Palm installation package by clicking the link below:. For the prediction of N-Myristoylation, S-Farnesylation and S-Geranylgeranylation sites, please use GPS-Lipid. Current Release: CSS-Palm 4.0. CSS-Palm 4.0 windows 20131223.exe. Mac OS X Platform. CSS-Palm 4.0 macos 20131223.dmg. CSS-Palm 4.0 unix 20131223.sh. Archive: CSS-Palm 3.0.

csspalm.biocuckoo.org

CSS-Palm - Palmitoylation Site Prediction

http://csspalm.biocuckoo.org/database.php

Last update: Feb. 27th, 2014. PALM Database Online Service. Please input one or multiple keywords to search the Palmitoylation find the related information you need:. Palmitoylation database provides three online advance options, including advance search,browse, BLAST search. Please input a PROTEIN.

polo.biocuckoo.org

GPS-Polo 1.0 - Prediction for Polo-like kinases

http://polo.biocuckoo.org/faq.php

Last update: Feb. 28th, 2014. How to use GPS-Polo 1.0 web service? Please visit the latest version of GPS-Polo 1.0 at http:/ polo.biocuckoo.org/down.php. I can't view the program properly, what should I do? Page or our website. However, for Mac OS, the GPS-Polo 1.0 could be used directly without any additional packages. Finally, if you can still not view the program properly, please send us an email and tell me the OS information on your computer. We will resolve the problem ASAP. And Dr. Jian Ren. By de...

polo.biocuckoo.org

GPS-Polo 1.0 - Prediction for Polo-like kinases

http://polo.biocuckoo.org/down.php

Last update: Feb. 28th, 2014. GPS-Polo 1.0 is ONLY freely available for academic research. And for commercial usage, please contact us. Please download GPS-Polo 1.0 installation package by clicking the link below:. Current Release: GPS-Polo 1.0. GPS-Polo 1 0 windows 20110330.exe. Mac OS X Platform. GPS-Polo 1 0 macos 20110330.dmg. GPS-Polo 1 0 unix 20110330.sh. After download just double-click on the software package to begin installation. Then follow the user prompts through the installation.

tsp.biocuckoo.org

GPS-TSP 1.0 - Prediction of Tyrosine of Sulfation Sites

http://tsp.biocuckoo.org/online.php

Last update: Oct. 20th, 2014. To use GPS-TSP 1.0 in your web browser, you should install Sun Microsystems Java Runtime Environment (JRE). To get the latest version of the JRE, please visit the http:/ java.com. Page, and choose the proper JRE package based on your operating system and browser. For convenience, you can also download the JRE packages from our website. If your sequences 1000. Please download the local version. The local version is more powerful and has more functions.

mba.biocuckoo.org

GPS-MBA 1.0 - MHC-binding Analyzer

http://mba.biocuckoo.org/faq.php

Last update: Feb. 28th, 2014. In TEDB 1.0 database, we tried to make it more powerful and convenient to be used. The online service and local packages were provided. This USAGE is prepared for the online service of the database. The TEDB 1.0 provide the search option and advance options. ( TEDB ID. Please click on the Example button to search RAN in Gene Name field. By clicking on the Submit button, the related tedb proteins will be shown. Will be shown by clicking on the Submit button. You can browse th...

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GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

Met and Ace. Regulators. Last update: Mar. 1st, 2018. Computational prediction of phosphorylation sites with their cognate protein kinases (PKs) is greatly helpful for further experimental design. Although 10 online predictors were developed, the PK classification and control of false positive rate ( FPR. Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.0. With novel Peptide Selection. Human PKs in hierarchy. This website is lin...

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