grch37.ensembl.org

Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Ensembl supports data from external projects through Trackhubs. 16 Jul 20...

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Ensembl Genome Browser | grch37.ensembl.org Reviews

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Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Ensembl supports data from external projects through Trackhubs. 16 Jul 20...

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Ensembl Genome Browser | grch37.ensembl.org Reviews

https://grch37.ensembl.org

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Ensembl supports data from external projects through Trackhubs. 16 Jul 20...

INTERNAL PAGES

grch37.ensembl.org

1

Species List

http://grch37.ensembl.org/info/about/species.html

Geek for a Week. Browser Genome Release Agreement. Ensembl name and logo policy. Credits for species images. About the Ensembl Project. The main Ensembl site focuses on vertebrate genomes - scroll down. For links to our sister sites covering invertebrates, plants, bacteria, etc. View the full Ensembl species tree. NB The table below shows only those species that were included in release 75 - for an up-to-date list, please see our main site at www.ensembl.org. Felis catus 6.2. Pan troglodytes 2.1.3.

2

Variant Effect Predictor

http://grch37.ensembl.org/info/docs/tools/vep

Examples and use cases. The VEP determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions. Simply input the coordinates of your variants and the nucleotide changes to find out the:. Affected by the variants. Of the variants (e.g. upstream of a transcript, in coding sequence, in non-coding RNA, in regulatory regions). Scores for changes to protein sequence. Suits smaller volumes of data.

3

Help - Homo sapiens - GRCh37 Archive browser 86

http://grch37.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

4

What's New in this release

http://grch37.ensembl.org/info/website/news.html

Pairwise Interactions File Formats. Coordinate Systems for custom tracks. Track Hub Support in Ensembl. Compare genes across species. Variants for my gene. ENCODE data in Ensembl. The GRCh37 assembly in Ensembl. Use my own data. Browse News by Topic. What's New in this release. Archives: Table of assemblies. What's New in this release. News for Ensembl GRCh37. New web displays and tools. New web displays and tools. Data slicer tool (all species). Variation Pattern Finder tool (all species). Release 71 (A...

5

Personal Data - Custom tracks - Homo sapiens - GRCh37 Archive browser 86

http://grch37.ensembl.org/UserData/ManageData?time=1439867039

Track Hub Registry Search. Your data p You can rename your uploads and attached URLs by clicking on their current name in the Source column /p p a href=/info/website/upload/index.html class=popup Help on supported formats, display types, etc /a /p. Search for public track hubs. Add a custom track. Name for this data (optional):. Human ( Homo sapiens. Paste in data or provide a file URL. Or upload file (max 20MB). Help on supported formats, display types, etc.

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asia.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://asia.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

mar2015.archive.ensembl.org

Ensembl genome browser 79: Homo sapiens - - Help

http://mar2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

jul2015.archive.ensembl.org

Ensembl genome browser 81: Homo sapiens - - Help

http://jul2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014.

genegrid.genomatix.com

User Manual | Documentation | GeneGrid

https://genegrid.genomatix.com/grid/doc/help/user-manual

GeneGrid enables you to quickly interpret SNVs and small indel variants from human sequencing data. Variants from targeted panels, exome and whole genome sequencing are annotated using a variety of annotation sources. You can filter the list for those annotated variants in the samples individually, perform trio analyses or compare case and control sets using multiple samples. GeneGrid is designed to support the latest web browsers. We support the current versions of Chrome. And Internet Explorer 11.

grch37.rest.ensembl.org

Ensembl GRCh37 Rest API - GET info/compara/methods

http://grch37.rest.ensembl.org/documentation/info/compara_methods

About the Ensembl Project. List all compara analyses available (an analysis defines the type of comparative data). Name of the callback subroutine to be returned by the requested JSONP response. Required ONLY when using JSONP as the serialisation method. Please see the user guide. The class of the method to query for. Regular expression patterns are supported. Name of the compara database to use. Multiple comparas may exist on a server when accessing Ensembl Genomes data. R = requests.get(server ext,...

grch37.rest.ensembl.org

Ensembl GRCh37 Rest API - GET info/assembly/:species/:region_name

http://grch37.rest.ensembl.org/documentation/info/assembly_stats

About the Ensembl Project. Returns information about the specified toplevel sequence region for the given species. The (top level) sequence region name. If set to 1, include karyotype band information. Only display if band information is available. Name of the callback subroutine to be returned by the requested JSONP response. Required ONLY when using JSONP as the serialisation method. Please see the user guide. R = requests.get(server ext, headers={ Content-Type : application/json}) if not r.ok:...Url =...

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COSMIC: Catalogue of Somatic Mutations in Cancer - Home Page

Data Download ▼. High quality curation by expert postdoctoral scientists. Additional tools to explore COSMIC. Further details on using COSMIC's content. How do we annotate genomes? Genomic Landscape of Cancer. Coding mutation consequence (most severe), as predicted by the VEP. The COSMIC Genome Browser. Displays all mutation information across all cancers and has been enhanced in v73 to include ENCODE regulatory features and all available SNPs. For more details, please see the datasheet. Wellcome Trust S...

grch37.ensembl.org

Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Ensembl supports data from external projects through Trackhubs. 16 Jul 20...

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Ensembl GRCh37 Rest API - Ensembl REST API Endpoints

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