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UW Genome Sciences

UW ranked #5 in Genetics / Genomics / Bioinformatics by US News. Dr Jay Shendure to lead The Brotman Baty Institute for Precision Medicine. Comprehensive single-cell transcriptional profiling of a multicellular organism. Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster. Systematic Characterization and Analysis of the Taxonomic Drivers of Functional Shifts in the Human Microbiome. Department of Genome Sciences.

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UW Genome Sciences | gs.washington.edu Reviews
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UW ranked #5 in Genetics / Genomics / Bioinformatics by US News. Dr Jay Shendure to lead The Brotman Baty Institute for Precision Medicine. Comprehensive single-cell transcriptional profiling of a multicellular organism. Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster. Systematic Characterization and Analysis of the Taxonomic Drivers of Functional Shifts in the Human Microbiome. Department of Genome Sciences.
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UW Genome Sciences | gs.washington.edu Reviews

https://gs.washington.edu

UW ranked #5 in Genetics / Genomics / Bioinformatics by US News. Dr Jay Shendure to lead The Brotman Baty Institute for Precision Medicine. Comprehensive single-cell transcriptional profiling of a multicellular organism. Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster. Systematic Characterization and Analysis of the Taxonomic Drivers of Functional Shifts in the Human Microbiome. Department of Genome Sciences.

SUBDOMAINS

pga.gs.washington.edu pga.gs.washington.edu

SeattleSNPs

Send email inquiries to:. Was funded as part of the National Heart Lung and Blood Institute's (NHLBI) Programs for Genomic Applications (PGA). The SeattleSNPs PGA focused on identifying, genotyping, and modeling the associations between single nucleotide polymorphisms (SNPs) in candidate genes and pathways that underlie inflammatory responses in humans. Added to Finished Genes Page Jun 18, 2009. Added to Finished Genes Page Jun 18, 2009. What is a PGA?

noble.gs.washington.edu noble.gs.washington.edu

Noble Research Lab

Department of Genome Sciences. Postdoctoral fellowships are available in machine learning methods, genomics, and proteomics. Back row: Damon May, Charles Grant, Lindsay Pino, Andy Lin, Giancarlo Bonora, Tim Durham, Joe Janizek. Front row: Jie Liu, Dejun Lin, Kate Cook, Bill Noble. Seated: Jeff Howbert, Otis. Professor, Genome Sciences. Postdoctoral fellow, Genome Sciences. Postdoctoral fellow, Genome Sciences. Postdoctoral fellow, Genome Sciences. Postdoctoral fellow, Genome Sciences. Is a motif-based hi...

nick-lab.gs.washington.edu nick-lab.gs.washington.edu

index.html

DATA SUBMISSION TO GENBANK. CHECK MASTER BLOCK DNA. EGP FINAL CLEAN-UP CHECKLIST. INSTRUCTIONS FOR GENE ANALYSIS USING ORACLE DATABASE. PGA GENE SUBMISSION PROTOCOL. Updated 2004.02.01). VG2 INFO / UPDATES. BIG DYE SEQUENCING PROTOCOL. BIG DYE TERMINATOR PROTOCOL. ADDING NEW USERS TO THE UNIX BOXES. CONSED 13.0 DOCUMENTATION. CONSED 13.0 ANNOUNCEMENT. GENOME/BIN PROGRAMS (SELECTED ONES). PHRED HELP AND DOCUMENTATION. POLYPHRED 3.5 DOCUMENTATION. POLYPHRED 4.0 DOCUMENTATION. POLYPHRED 4.2 DOCUMENTATION.

mrhgsv.gs.washington.edu mrhgsv.gs.washington.edu

Eichlerlab Human Structural Variation Database

Description of browser tracks. Web and Browser Contact. Human Genome Structural Variation Project. 1 In-house UCSC browser mirror site with all clone tracks. Position or search term. View in genome browser. 2 NCBI Structural Variation Project. All data is based on the published finishing genome and will be used as the sole reference. For liftover data on newer assemblies, see genome.ucsc.edu. Or tcag.sickkids.edu.

mouseparalogy.gs.washington.edu mouseparalogy.gs.washington.edu

Mouse Paralogy

MGSCv3 (mm2) Duplication Analyses. Build36 (mm8) Duplication Analyses. This web site represents the segmental duplication-related analysis within the mouse genome. Two complementary methods were used to detect segmental duplications in MGSCv3 (mm2) and Build36 (mm8) of the C57Bl/6J mouse genome assemblies:. Whole Genome Analysis Comparison (WGAC). Whole-Genome Shotgun Sequence Detection (WSSD).

gsoutreach.gs.washington.edu gsoutreach.gs.washington.edu

University of Washington Department of Genome Sciences, Education Outreach

University of Washington Department of Genome Sciences, Education Outreach. Genome Sciences Education Outreach at the University of Washington in Seattle develops innovative programs that bring leading-edge science to teachers and students in K-12 schools. These programs provide interdisciplinary, hands-on science curricula, teacher training, equipment, and support to promote systemic change in schools. Genes, the Environment, and Me: Health and STEM Network. Our previous project,. StarNet: Research Expe...

gs-its.gs.washington.edu gs-its.gs.washington.edu

GS-ITS: Genome Sciences Information Technology Services

Customer Service Data Management High Performance Computing Information Security. Genome Sciences research computing environment includes 6000 CPU cores, 6 Petabytes of network available disk based storage, representing more than $15M invested in HPC equipment over the last 5 years. It is the largest research computing operation at the University of Washington. About Genome Sciences IT Services. Tools for self-managing GSDS accounts. Contacting GS-ITS and Getting Help. GS-ITS for department members.

grc.gs.washington.edu grc.gs.washington.edu

Northwest Genomics Center

Skip to main content. Sample Prep and Sequencing. Welcome to the Northwest Genomics Center. The Pacific Northwest’s Premier Next-Generation Sequencing Center.

exome.gs.washington.edu exome.gs.washington.edu

Exome Project

Current Exome Project Participants.

INTERNAL PAGES

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1

UW Genome Sciences: Department News

http://www.gs.washington.edu/news/news.htm

Has been awarded a Robert D. Watkins Graduate Research Fellowship from the American Society for Microbiology. Has been awarded the Prix Galien 2015 Pro Bono Humanum Award. Altius Institute for Biomedical Sciences. To be led by Dr. John Stamatoyannopoulos. Has received a Burroughs Wellcome Young Investigator in the Pathogenesis of Infectious Diseases. Has been selected as a Howard Hughes Medical Institute Investigator. Has been named to the American Academy of Arts and Sciences. Has been selected as a rec...

2

UW Genome Sciences

http://www.gs.washington.edu/index.htm

Has been awarded the National Medal of Science. And the Szent-Györgyi Prize for Progress in Cancer Research. Long-read sequence assembly of the gorilla genome. 2015 Highly Cited Researchers list from Thomson Reuters. Includes Drs. Evan Eichler, Deborah Nickerson, William Noble, Judit Villen, and David Baker. The UW SACNAS Chapter. Has been awarded the Outstanding Chapter of the Year award at the 2015 SACNAS Conference. Researchers awarded $12 million to study the human genome in 4-D. Describing improved ...

3

UW Genome Sciences: Genome Training Grant

http://www.gs.washington.edu/academics/genometg/index.htm

Information for current predocs. Informaton for current postdocs. List of current trainees. For further information, please contact Brian Giebel at bgiebel [ a t ] uw.edu .

4

UW Genome Sciences: Combi Seminars

http://www.gs.washington.edu/news/combi.htm

Co-sponsored by the Department of Genomes Sciences and the Computational Molecular Biology (CMB) Program, the Combi Seminars focus specifically on developments in molecular and computational biology-related research and often feature UW faculty and researchers from regionally affiliated centers and institutes. All Combi Seminars take place on Wednesdays from 1:30 - 2:30. In Foege Auditorium unless otherwise noted. Please follow this link for a listing of past seminars.

5

UW Genome Sciences: Mary-Claire King

http://www.gs.washington.edu/faculty/king.htm

Professor of Genome Sciences and of Medicine (Medical Genetics). A t ] u.washington.edu. For more than 40 years, my group has used approaches from genetics, genomics, statistics, and molecular biology to characterize inherited breast cancer. In 1990, we demonstrated that breast cancer is genetically inherited in some families by mapping to chromosome 17q21 the gene we named. Friedman LS, Ostermeyer EA, Szabo CI, Dowd P, Lynch ED, Rowell SE, King M-C. Confirmation of. 302: 643-6, 2003. 107: 12629-33, 2010.

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gsoutreach.gs.washington.edu gsoutreach.gs.washington.edu

The GENETICS Project - UW Genome Sciences Education Outreach

https://gsoutreach.gs.washington.edu/programs/the-genetics-project

University of Washington Department of Genome Sciences, Education Outreach. The GENETICS Project (1999-2003) fostered excellence in K-12 genetics teaching in Washington State. We provided professional development to elementary, middle, and high school teachers and identified and developed outstanding genetics instructional materials. Through the activity,. Students learn the principles of inheritance as they construct a family of styrofoam creatures. Genes, the Environment, and Me (GEM). Awarded the July...

bradleybiology.org bradleybiology.org

Bradley Lab

http://bradleybiology.org/join

What kind of training will I get in the lab? Graduate students from the Molecular and Cellular Biology Program. The Medical Scientist Training Program. And the Institute for Public Health Genetics. At the University of Washington. Can join the lab. Students from departments such as Genome Sciences. Are welcome as well; please contact us with any questions. Rotation students are welcome. Please send a CV (in PDF format), names of at least two references, and a description of your research interests.

fredhutch.org fredhutch.org

Researcher Profiles - Fred Hutchinson Cancer Research Center

http://www.fredhutch.org/en/labs/profiles.html

Select a letter to display a list of Faculty members. Jennifer E. Adair, PhD. Assistant Member, Clinical Research Division. Research Assistant Professor of Medical Oncology, University of Washington School of Medicine. Retrovirus-based gene transfer into hematopoietic stem cells has emerged as a viable treatment for genetic, malignant and infectious diseases with the potential to significantly decrease global disease burden. Robyn Andersen, PhD. Member, Public Health Sciences Division. Jihong Bai, PhD.

brucelab.gs.washington.edu brucelab.gs.washington.edu

Bruce Lab - Software

http://brucelab.gs.washington.edu/software.php

PIR Spectral Libraries for use with SpectraST. Download .zip file. Download .zip file. Download .zip file. XLmap: an R package to visualize and score protein structure models based on sites of protein cross-linking. Download (latest): Version 0.2.1. Download: Version 0.1.4. Version 0.1.3. XLmap: an R package to visualize and score protein structure models based on sites of protein cross-linking. In Press,DOI: 10.1093/bioinformatics/btv519). Online Versions of ContactMapper. To install package in R:.

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UW Genome Sciences

UW ranked #5 in Genetics / Genomics / Bioinformatics by US News. Dr Jay Shendure to lead The Brotman Baty Institute for Precision Medicine. Comprehensive single-cell transcriptional profiling of a multicellular organism. Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster. Systematic Characterization and Analysis of the Taxonomic Drivers of Functional Shifts in the Human Microbiome. Department of Genome Sciences.

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