haplotype-reference-consortium.org haplotype-reference-consortium.org

haplotype-reference-consortium.org

The Haplotype Reference Consortium

Official website of the Haplotype Reference Consortium

http://www.haplotype-reference-consortium.org/

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The Haplotype Reference Consortium | haplotype-reference-consortium.org Reviews
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Official website of the Haplotype Reference Consortium
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1 overview
2 participating cohorts
3 using the resource
4 site list
5 goal
6 uses
7 and phasing
8 benefits
9 ancestry
10 timelines
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overview,participating cohorts,using the resource,site list,goal,uses,and phasing,benefits,ancestry,timelines,first release,publications,report abuse,print page,powered by,google sites
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The Haplotype Reference Consortium | haplotype-reference-consortium.org Reviews

https://haplotype-reference-consortium.org

Official website of the Haplotype Reference Consortium

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haplotype-reference-consortium.org haplotype-reference-consortium.org
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Report Abuse

http://www.haplotype-reference-consortium.org/system/app/pages/reportAbuse

By submitting this form, you are alerting the Google Sites team that this site has content that is in violation of our Terms of Use. Why are you reporting the content on this Site as inappropriate? This Site contains spam. This Site contains phishing. This Site contains malware. This Site contains sexually explicit material (like pornography or nudity). This Site contains content that is harassing me or someone else. This Site promotes violence or has hate speech.

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Site list - The Haplotype Reference Consortium

http://www.haplotype-reference-consortium.org/site

The Haplotype Reference Consortium. A site list for HRC release 1.1 is now available here (See notes below). Ftp:/ ngs.sanger.ac.uk/production/hrc/HRC.r1-1/HRC.r1-1.GRCh37.wgs.mac5.sites.vcf.gz. Ftp:/ ngs.sanger.ac.uk/production/hrc/HRC.r1-1/HRC.r1-1.GRCh37.wgs.mac5.sites.tab.gz. A README file that describes the contents of these files is available here. Ftp:/ ngs.sanger.ac.uk/production/hrc/HRC.r1-1/README. The problem described below has now been fixed. Our plan is to recalculate genotype evidence for ...

3

Participating cohorts - The Haplotype Reference Consortium

http://www.haplotype-reference-consortium.org/participating-cohorts

The Haplotype Reference Consortium. A growing list of cohorts/groups that are contributing to the consortium is as follows.

4

The Haplotype Reference Consortium

http://www.haplotype-reference-consortium.org/home

The Haplotype Reference Consortium. The Haplotype Reference Consortium (HRC) will create a large reference panel of human haplotypes by combining together sequencing data from multiple cohorts. The reference panel will be used for genotype imputation. In other cohorts, typically genome-wide association studies (GWAS). Where genotypes are available from genome-wide SNP microarrays. Consists of 64,976 haplotypes at.

5

Using the resource - The Haplotype Reference Consortium

http://www.haplotype-reference-consortium.org/data-access

The Haplotype Reference Consortium. Free imputation servers will allow anyone to use the full haplotype reference panel to impute missing genotypes in their data. Users will be able to upload (pre-phased or unphased) genotype data to the server. Imputation will be carried out remotely on the server, and the imputed data will then be made available to the user. Prototype imputation servers are already available at. Https:/ imputation.sanger.ac.uk/. Https:/ imputationserver.sph.umich.edu/.

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warrenwk.com warrenwk.com

Warren W. Kretzschmar

http://www.warrenwk.com/projects

Warren W. Kretzschmar. I am a DPhil (PhD) student in the Marchini Group. At the University of Oxford. My research focuses on creating statistical methods for haplotype phasing and genotype imputation that scale well with sample size. I also apply these methods to large human sequencing projects such as the CONVERGE.

warrenwk.com warrenwk.com

Warren W. Kretzschmar

http://www.warrenwk.com/home

Warren W. Kretzschmar. I am a DPhil (PhD) student in the Marchini Group. At the University of Oxford. My research focuses on creating statistical methods for haplotype phasing and genotype imputation that scale well with sample size. I also apply these methods to large human sequencing projects such as the CONVERGE.

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haplotype-reference-consortium.org haplotype-reference-consortium.org

The Haplotype Reference Consortium

The Haplotype Reference Consortium. The Haplotype Reference Consortium (HRC) will create a large reference panel of human haplotypes by combining together sequencing data from multiple cohorts. The reference panel will be used for genotype imputation. In other cohorts, typically genome-wide association studies (GWAS). Where genotypes are available from genome-wide SNP microarrays. Consists of 64,976 haplotypes at. SNPs, all with an estimated minor allele count of = 5.

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Haplotype Home

Haplotypes can help us to map the history of population movement, structure and clusters. If you want to find out where your ancestors came from. Haplotypes can help to trace your ancestry. Is a group of genes, which is inherited together by an organism from a single parent. Useful web sites : www.genome.gov.uk. Contact : info@haplotype.co.uk.

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USDA/ARS Children's Nutrition Research Center. Department of Molecular and Human Genetics. Baylor College of Medicine. The lab headed by Dr. Yongtao Guan is a computational lab with primary research interests in developing statistical and computational methods to address problems arising from genetics and genomics. Current projects include:. A directed acylic graph (DAG) specifies a joint distribution on all nodes in the graph. The joint distribution itself is of interest in many genetic applications...

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HAPLOTYPE ANALYSIS is a new software for analysis of data from organelle genomes (chloroplast or mitochondrial) which are observed from microsatellites (SSR) or PCR-RFLP markers. The main advantage of this software is that the analysis is performed based on the frequency of haplotypes, which was identified by combining the size variants at the investigated microsatellites (SSR) loci or by combining the restricted fragments of PCR-RFLP loci. The number of different haplotypes. Nei’s minimum genetic ...