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Yongjin's Bioinformatics Blog | Notes and thoughts in Bioinformatics.Notes and thoughts in Bioinformatics.
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Yongjin's Bioinformatics Blog | Notes and thoughts in Bioinformatics. | hrbrocky.wordpress.com Reviews
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Notes and thoughts in Bioinformatics.
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GFF3 file used in TopHat and Cufflink | Yongjin's Bioinformatics Blog
https://hrbrocky.wordpress.com/2012/02/20/gff3-file-used-in-tophat-and-cufflink
Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. Stuctural variation detection algorithms. Perl random number nomal distributation using matlab →. GFF3 file used in TopHat and Cufflink. February 20, 2012. Here is the description of GFF3 file format. Http:/ www.sequenceontology.org/resources/gff3.html. The GFF3 file for human can be downloaded from MPG website. Http:/ galaxy.fml.mpg.de/library common/browse library? Http:/ www.sequenceontology.org/resources/databases.html. Michael Zhan...
Groupwise association test for rare variants | Yongjin's Bioinformatics Blog
https://hrbrocky.wordpress.com/2011/07/18/groupwise-association-test-for-rare-variants
Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. Craig J. Venter’s Talk on synthetic Biology →. Groupwise association test for rare variants. July 18, 2011. Http:/ genetics.cs.ucla.edu/rarevariants/. Groupwise Association Test for Rare Variants. Madsen BE, Browning SR (2009). A Groupwise Association Test for Rare Mutations Using a Weighted Sum Statistic. PLoS Genet 5(2): e1000384. Association studies for next-generation sequencing. Li Luo, Eric Boerwinkle, and Momiao Xiong.
stuctural variation detection algorithms | Yongjin's Bioinformatics Blog
https://hrbrocky.wordpress.com/2011/08/20/stuctural-variation-detection-algorithms
Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. Craig J. Venter’s Talk on synthetic Biology. GFF3 file used in TopHat and Cufflink →. Stuctural variation detection algorithms. August 20, 2011. AGE: defining breakpoints of genomic structural variants at single-nucleotide resolution, through optimal alignments with gap excision, Bioinformatics,Volume27, Issue5, Pp. 595-603. A researcher in Bioinformatics and Computational Biology. View all posts by Rocky →. Leave a Reply Cancel reply.
Rocky | Yongjin's Bioinformatics Blog
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Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. A researcher in Bioinformatics and Computational Biology. BWA is more sensentive than Bowtie? March 31, 2012. Read/1 CATTACCCCAACTAAACATACAAACTGCTTACAGATTTGCTGAAATTGTC read/2 TGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGA I tried various parameters to map this paired-end reads to hg19 using bowtie, but failed. BWA can map this paired end reads to hg19 correctly. Perl random number nomal distributation using matlab. March 25, 2012.
Yongjin's Bioinformatics Blog | Notes and thoughts in Bioinformatics. | Page 2
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Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. Newer posts →. June 19, 2011. Genome-wide strategies for detecting multiple loci that influence complex diseases, Nature Genetics 37, 413 – 417 (2005) http:/ www.nature.com/ng/journal/v37/n4/abs/ng1537.html. Finding the missing heritability of complex diseases, Nature 461, 747-753 (8 October 2009). Http:/ www.nature.com/nature/journal/v461/n7265/abs/nature08494.html. February 25, 2011. Sed 是很有用 但常被遗忘 的 UNIX 流编辑器。 本文是 前一篇介绍 sed 文章. Sed -...
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Yongjin's Bioinformatics Blog | Notes and thoughts in Bioinformatics.
Yongjin's Bioinformatics Blog. Notes and thoughts in Bioinformatics. BWA is more sensentive than Bowtie? March 31, 2012. I tried various parameters to map this paired-end reads to hg19 using bowtie, but failed. BWA can map this paired end reads to hg19 correctly. Perl random number nomal distributation using matlab. March 25, 2012. 8212;—————————————————–. This is a matlab script. Rn=round(random(‘normal’,256,512,1000000,1) ;. Rn(find(rn 64) =[];. Rn(find(rn 1024) =[];. Fprintf(fid,’%d n’,rn);. CNVnator:...
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