aravindachakravartilab.org
Career
http://www.aravindachakravartilab.org/pro/Career.html
FOR PROSPECTIVE GRADUATE STUDENTS, POSTDOCTORAL FELLOWS AND OTHER TRAINEES. I am always in the search for good graduate students and postdoctoral fellows to join my laboratory. I find my laboratory exciting precisely because of my trainees who bring new perspectives, questions and ideasand, of course, new interests and new personalities!
hopkinsgenetics.org
MD-GEM: About
http://www.hopkinsgenetics.org/about
The Maryland Genetics, Epidemiology, and Medicine Training Program. Sept 13, 2016. Sept 13, 2016. Sept 27, 2016. Oct 11, 2016. Oct 11, 2016. Oct 25, 2016. Nov 8, 2016. Nov 8, 2016. Nov 22, 2016. Dec 13, 2016. For the SPH program and Sandy Muscelli. For the SOM program. Program Administrator, SPH. Program Administrator, IGM. Friday Aug. 26th.
aravindachakravartilab.org
Members
http://www.aravindachakravartilab.org/pro/Members.html
My laboratory focuses on the development and applications of molecular genetic, genomic and computational methods for identification of human disease genes through genetic dissection. We use a variety of disease models to infer the features of complex disease gene architecture in birth defects (Hirschsprung disease), cardiovascular disorders (hypertension, sudden cardiac death) and mental illness (autism, bipolar disease, schizophrenia). Kapoor, A,. Chatterjee, S,. Kapoor, A,. An enhancer polymorphism at...
ccb.jhu.edu
Kraken
http://ccb.jhu.edu/software/kraken
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. Previous attempts by other bioinformatics software to accomplish this task have often used sequence alignment or machine learning techniques that were quite slow, leading to the development of less sensitive but much faster abundance estimation programs. Kraken aims to achieve high sensitivity and high speed by utilizing exact alignments of k-mers and a novel classification algo...18 MB...
ccb.jhu.edu
CCB Software
http://ccb.jhu.edu/software.shtml
Next-Generation Sequence Alignment Software. Genome Assembly and Large-Scale Genome alignment. Next-generation sequence alignment software. TopHat-Fusion is an enhanced version of TopHat with the ability to align reads across fusion points, which results from the breakage and re-joining of two different chromosomes, or from rearrangements within a chromosome. HISAT is a new, highly efficient system for aligning RNA-seq reads. HISAT uses a new indexing scheme, hierarchical indexing, which is inherentl...
ccb.jhu.edu
CCB at JHU
http://ccb.jhu.edu/index.shtml
The Center for Computational Biology. A joint research center in the McKusick-Nathans Institute of Genetic Medicine, spanning the School of Medicine, the Whiting School of Engineering, the Bloomberg School of Public Health, and the Krieger School of Arts and Sciences. Oct 26-29, 2016. The 2016 Biological Data Science conference. At Cold Spring Harbor Lab is co-chaired by CCB members Jeff Leek (Biostatistics) and Michael Schatz (Computer Science). August 11, 2016. July 9, 2016. June 14, 2016. May 26, 2016.
ccb.jhu.edu
People at CCB
http://ccb.jhu.edu/people.php
Steven L. Salzberg, Ph.D. Professor of Biomedical Engineering, Computer Science, and Biostatistics. Director, Center for Computational Biology. Computational Biology Consulting Core. McKusick-Nathans Institute of Genetic Medicine. Department of Biomedical Engineering. Johns Hopkins University School of Medicine. Dan Arking, Ph.D. McKusick-Nathans Institute of Genetic Medicine. Department of Medicine, Division of Cardiology. Johns Hopkins University School of Medicine. Joel Bader, Ph.D. 97;jbattle. Johns ...
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