khinsen.wordpress.com
Konrad Hinsen's Blog(by Konrad Hinsen)
http://khinsen.wordpress.com/
(by Konrad Hinsen)
http://khinsen.wordpress.com/
TODAY'S RATING
>1,000,000
Date Range
HIGHEST TRAFFIC ON
Friday
LOAD TIME
0.1 seconds
16x16
32x32
PAGES IN
THIS WEBSITE
12
SSL
EXTERNAL LINKS
24
SITE IP
192.0.78.13
LOAD TIME
0.129 sec
SCORE
6.2
Konrad Hinsen's Blog | khinsen.wordpress.com Reviews
https://khinsen.wordpress.com
(by Konrad Hinsen)
khinsen.wordpress.com
The compartmentalization of knowledge | Konrad Hinsen's Blog
https://khinsen.wordpress.com/2015/06/05/the-compartmentalization-of-knowledge
Konrad Hinsen's Blog. Laquo; Software in scientific research. Another look at Julia. The compartmentalization of knowledge. Now that the birch pollen season is definitely over, I can draw some conclusions from a two-year experiment with the impressive sample size of one – myself. As you will see, my topic is not so much the experiment itself, but the circumstances in which it happened. So far for the motivation for my recent experiment. Last year I discovered, somewhat by accident, a herbalist. This comp...
Konrad Hinsen's Blog | Page 2
https://khinsen.wordpress.com/page/2
Konrad Hinsen's Blog. Drawing conclusions from empirical science. Posted December 29, 2014 by Konrad Hinsen. A recent paper in PLOS One. Made some noise in my twittersphere over the Christmas days. It compares the productivity of writing scientific documents using Microsoft Word and using LaTeX, and concludes that Microsoft Word is so clearly superior that, in the interest of saving taxpayers’ money, scientific publishers should abandon LaTeX to allow authors to become more productive. You will find stud...
Reproducibility, replicability, and the two layers of computational science | Konrad Hinsen's Blog
https://khinsen.wordpress.com/2014/08/27/reproducibility-replicability-and-the-two-layers-of-computational-science
Konrad Hinsen's Blog. Laquo; A first experience with Open Access publishing. The state of NumPy. Reproducibility, replicability, and the two layers of computational science. 8221; or “Does ligand A bind more strongly to protein X than ligand B? 8221; It can also be a number, as in “What is the lattice energy of NaCl? 8221;, or a mathematical function, as in “How does a spring’s restoring force vary with elongation? A bug in the software (uninitialized variables, compiler bugs, …). Which stresses the impo...
April | 2015 | Konrad Hinsen's Blog
https://khinsen.wordpress.com/2015/04
Konrad Hinsen's Blog. Archive for April 2015. Laquo; Konrad Hinsen's Blog home page. Software in scientific research. April 23, 2015. In a recent blog post. Titus Brown asks if software is a primary product of science, and basically says “no” (but do read the post for the details). A blog-post length reply. Titus introduces a useful criterion for what “primary product of science” is: could you get a Nobel prize for it? Clearly not. Like an invention? 8221; and “How efficient is it? 8221; When considering...
Why bitwise reproducibility matters | Konrad Hinsen's Blog
https://khinsen.wordpress.com/2015/01/07/why-bitwise-reproducibility-matters
Konrad Hinsen's Blog. Laquo; Drawing conclusions from empirical science. Software in scientific research. Why bitwise reproducibility matters. While reading the final report. Of the reproducibility workshop. At XSEDE14, I noticed a statement that I encounter frequently in discussions about reproducible research:. 8220;One general consensus was that bitwise reproducibility is often an unrealistic expectation”. If you accept the idea that floating-point operations are only approximate, the notion of a comp...
TOTAL PAGES IN THIS WEBSITE
12
technicaldiscovery.blogspot.com
Technical Discovery: Passing the torch of NumPy and moving on to Blaze
http://technicaldiscovery.blogspot.com/2012/12/passing-torch-of-numpy-and-moving-on-to.html
Sunday, December 16, 2012. Passing the torch of NumPy and moving on to Blaze. I wrote this letter tonight to the NumPy mailing list - - a list I have been actively participating in for nearly 15 years. Greg Wilson (of Software Carpentry fame) asked me recently what letter I would have written to myself 5 years ago. What would I tell myself to do given the knowledge I have now? 4) Define missing-value data-types and labels on the dimensions and arrays. 6) Start work on SQL interface to NumPy arrays *now*.
The one where I went to Sweden | The Devil in the Details
https://blog.karinlag.no/2014/06/sweden
The Devil in the Details. The one where I went to Sweden. I spent some days two weeks ago in Stockholm, Sweden. Lex Nederbragt. And I were invited by SciLifeLab. To teach a Software Carpentry. Workshop there. This coincided with the very first PyCon Sweden Conference. And as the organizers would have it, I got to present a talk. The workshop went very well. Lex and I taught the by-now fairly well known novice workshop. If you want one at your institution, let them know. The conference and my talk. Speaki...
Konrad Hinsen — Theoretical Biophysics, Molecular Simulation, and Numerically Intensive Computation
http://dirac.cnrs-orleans.fr/plone/Members/hinsen
Theoretical Biophysics, Molecular Simulation, and Numerically Intensive Computation. High Pressure Molecular Biophysics Conference 2008. Publications by Konrad Hinsen. Courses and Lecture Notes. Elastic Network Models for proteins. Software for normal mode calculations on a protein crystal. Data/parameter ratio in X-ray structure determination. Research scientist at the Centre de Biophysique Moléculaire. Associated scientist at the Synchrotron SOLEIL. In Saint Aubin (France). And the IEEE Computer Society.
Composition is the root of all evil
http://blog.khinsen.net/posts/2016/03/04/composition-is-the-root-of-all-evil
Composition is the root of all evil. Composing information is something we all do every day, mostly without thinking of it. A shopping list is the composition of names of things you need to buy. An e-mail message is the composition of the recipients’ addresses, a subject line, and the body of the message. An address book is a composition of addresses, which in turn are compositions of various pieces of information related to some person. When you look at these examples more closely, you might notice that...
From facts to narratives
http://blog.khinsen.net/posts/2015/12/08/from-facts-to-narratives
From facts to narratives. A computational notebook, as pioneered by Mathematica. And recently popularized by Jupyter. Inverts this relation by embedding the code into a narrative. Computers are good at handling facts but not narratives. Humans are good at handling narratives but not facts in the quantities that typically define a computation. Letting computers intervene in the processing of narratives leads to funny results - try Google Translate. On HDF5 and the future of data management. This blog star...
A rant about software deployment in 2015
http://blog.khinsen.net/posts/2015/11/06/a-rant-about-software-deployment-in-2015
A rant about software deployment in 2015. The software that I installed is nMOLDYN. An analysis tool for Molecular Dynamics trajectories. From a software engineering point of view, this is a rather standard Python program building on NumPy. For its computations and on Tkinter. For the graphical user interface. There is no need for anything on the bleeding edge, a decent three-year old installation of the scientific Python stack would support this perfectly well. And copy data in and out using. Of all the...
Posts tagged 'scientific computing'
http://blog.khinsen.net/tags/scientific-computing.html
Composition is the root of all evil. Hellip; more …. On HDF5 and the future of data management. Yesterday a blog post. By Cyrille Rossant entitled “Moving away from HDF5” caught my eye. My own tendency at the moment is to use HDF5 more and more, so I was interested in why someone else would want to do the opposite. Here is my conclusion after reading his post, plus some ideas about where scientific data management is or should be heading in my opinion. Hellip; more …. Hellip; more ….
The lifecycle of digital scientific knowledge
http://blog.khinsen.net/posts/2015/11/09/the-lifecycle-of-digital-scientific-knowledge
The lifecycle of digital scientific knowledge. For climate research, which takes the form of a software package. Most often, the status of computational models is more fuzzy. As an example, consider force fields for proteins such as AMBER. Which authoring tools are available to support such work? From facts to narratives. A rant about software deployment in 2015. This blog starts in November 2015. For older posts, see my old WordPress blog.
Posts tagged 'computational science'
http://blog.khinsen.net/tags/computational-science.html
Composition is the root of all evil. Hellip; more …. From facts to narratives. Hellip; more …. The lifecycle of digital scientific knowledge. Hellip; more …. This blog starts in November 2015. For older posts, see my old WordPress blog.
On HDF5 and the future of data management
http://blog.khinsen.net/posts/2016/01/07/on-hdf5-and-the-future-of-data-management
On HDF5 and the future of data management. Yesterday a blog post. By Cyrille Rossant entitled “Moving away from HDF5” caught my eye. My own tendency at the moment is to use HDF5 more and more, so I was interested in why someone else would want to do the opposite. Here is my conclusion after reading his post, plus some ideas about where scientific data management is or should be heading in my opinion. The peculiar combination of requirements that to the best of my knowledge only HDF5 fulfills is:. For job...
TOTAL LINKS TO THIS WEBSITE
24
khinsboutique.com
Notice: This domain name expired on 03/05/17 and is pending renewal or deletion. This domain registration expired on 03/05/2017. Do you own this domain? Use of this Site is subject to express terms of use. By using this site, you signify that you agree to be bound by these Universal Terms of Service.
kHinsch (Aaaarrrrrrr Baaaam!) - DeviantArt
Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) " class="mi". Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) ". Join DeviantArt for FREE. Forgot Password or Username? Design and Interfaces / Hobbyist. Deviant for 5 Years. Enjoy lovers of minimalistic. Give Energy To Your Desktop. Last Visit: 33 weeks ago. This deviant's activity is hidden. Deviant since Jun 28, 2010. AdCast...
Konrad Hinsen
Publication list at ORCID. I am a researcher at the CNRS. Centre National de la Recherche Scientifique). I work at the Centre de Biophysique Moléculaire. In Orléans and as an associate researcher at the Synchrotron SOLEIL. My two main current fields of research are. The structure and dynamics of proteins, using molecular simulation and statistical physics. Much of my work is method development, in particular in the field of Elastic Network Models. Where I am in charge of the Scientific Programming. As a ...
Konrad Hinsen's Blog
Konrad Hinsen's Blog. This blog is moving! Posted November 12, 2015 by Konrad Hinsen. Welcome to the last post on this WordPress blog. I have set up a new blog. For all my future writing. My new blog is hosted on GitHub. And powered by Frog. A static Web site generator that mixes my posts written as plain Markdown. Files with HTML templates based on the Bootstrap. That contains my blog. But the easiest way to learn about new posts is to follow me on Twitter. Be the first to comment. Including the questio...
Kingdom Hearts Insider
New Kingdom Hearts 3 screenshots and renders released! Watch The New Kingdom Hearts 3 Trailer Now! Utada Hikaru's new song for KINGDOM HEARTS 3: "Oath". KINGDOM HEARTS Union χ[Cross]. KINGDOM HEARTS HD 1.5 ReMIX. KINGDOM HEARTS HD 2.5 REMIX. KINGDOM HEARTS HD 2.8 Final Chapter Prologue. The World Ends With You. Video Game MIDI files. Ever been frustrated by the Keyblade's functionality within the series? Tell us how you'd like to improve on the Keyblade's combat functions within the Kingdom Hearts. The L...
khinsider.org - This domain may be for sale!
Find the best information and most relevant links on all topics related to khinsider.org. This domain may be for sale!
KHInsider
Here are a few links to our site's interview archives, image galleries, and our own graphics made by our past and present staff! Since 2003, KINGDOM HEARTS Insider has been the largest fan community and news resource on the web for the series. We are your one stop shop for all your Kingdom Hearts news, media, discussion, and fandom, from the original, to Birth by Sleep, KINGDOM HEARTS III, and beyond! Kingdom Hearts Tsum Tsum’s are coming to Japan very soon! Jan 25, 2018 , with 705 Keyblades. You guys we...
Coming Soon
Future home of something quite cool. If you're the site owner. To launch this site. If you are a visitor.
khinson (Karen Hinson) | DeviantArt
Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) ; this.removeAttribute('onclick')". Traditional Art / Hobbyist. Deviant for 11 Years. 2 Month Core Membership. This deviant's activity is hidden. Deviant since Aug 29, 2006. Core Member until May 24, 2018. This is the place where you can personalize your profile! By moving, adding and personalizing widgets. You can drag and drop to rearrange. You can edit widgets to customize them. Padme Amid...
SOCIAL ENGAGEMENT