kinasephos2.mbc.nctu.edu.tw

KinasePhos 2.0

Version of kinase-specific phosphorylation site prediction tool that is based the sequenece-based amino acid coupling-pattern analysis and solvent accessibility as new features of SVM (support vector machine). Paste a single sequence or several sequences in FASTA. Format into the field below:. Submit a file ( 2MB) in FASTA. Format directly from your local disk:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). G protein-coupled receptor kinase(GRK).

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KinasePhos 2.0 | kinasephos2.mbc.nctu.edu.tw Reviews

<META> DESCRIPTION

Version of kinase-specific phosphorylation site prediction tool that is based the sequenece-based amino acid coupling-pattern analysis and solvent accessibility as new features of SVM (support vector machine). Paste a single sequence or several sequences in FASTA. Format into the field below:. Submit a file ( 2MB) in FASTA. Format directly from your local disk:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). G protein-coupled receptor kinase(GRK).

<META> KEYWORDS

1 case study 1

2 gp1bb human

3 case study 3

4 cald1 chick

5 case study 5

6 dham ecoli

7 case study 2

8 ctnb1 human

9 case study 4

10 sit1 rat

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case study 1,gp1bb human,case study 3,cald1 chick,case study 5,dham ecoli,case study 2,ctnb1 human,case study 4,sit1 rat,citing kinasephos2 0,choose your specificity,default,serine s kinase,select all,dna dependent protein kinase dna pk,cam kinase cam

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KinasePhos 2.0 | kinasephos2.mbc.nctu.edu.tw Reviews

https://kinasephos2.mbc.nctu.edu.tw

Version of kinase-specific phosphorylation site prediction tool that is based the sequenece-based amino acid coupling-pattern analysis and solvent accessibility as new features of SVM (support vector machine). Paste a single sequence or several sequences in FASTA. Format into the field below:. Submit a file ( 2MB) in FASTA. Format directly from your local disk:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). G protein-coupled receptor kinase(GRK).

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kinasephos2.mbc.nctu.edu.tw

1

KinasePhos 2.0

http://kinasephos2.mbc.nctu.edu.tw/case1.html

Platelet glycoprotein Ib beta chain [Precursor]. GP-Ib beta ;GPIbB;,GPIb-beta ;Antigen CD42b-beta ;CD42c antigen. Paste a single sequence or several sequences in FASTA. Format into the field below:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). MAP kinase-activated protein kinase 2(MAPKAPK2). G protein-coupled receptor kinase(GRK). Cell division cycle protein kinase(CDC2). Abl Protein Tyrosine Kinase(Abl). Hepatocyte growth factor receptor(MET).

2

KinasePhos 2.0

http://kinasephos2.mbc.nctu.edu.tw/tutorial.html

Welcome to KinasePhos 2.0. In this page, we will show you how to use KinasePhos 2.0. Input one or more sequences. 8251; Result Page. Bid Lab, Institute of Bioinformatics, National Chiao Tung University , Taiwan. Contact us: bryan@mail.nctu.edu.tw. With questions or comments. Websites: http:/ KinasePhos2.mbc.nctu.edu.tw/.

3

KinasePhos 2.0

http://kinasephos2.mbc.nctu.edu.tw/document.html

Denotes the amino acid coupling-pattern of amino acid types. That are separated by d amino acids. We use the coupling strength. Defined by coupling-pattern analysis, and we compute the differences between positive and negative set of phosphorylation proteins. We select the features which are top 250 differences of. Denote the amino acid-coupling pattern of amino acids type. That are separated by. Amino acids. Since the protein sequence is directional, the sign of. Is closer to the N terminal side,.

4

KinasePhos 2.0

http://kinasephos2.mbc.nctu.edu.tw/case5.html

PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM. Paste a single sequence or several sequences in FASTA. Format into the field below:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). MAP kinase-activated protein kinase 2(MAPKAPK2). G protein-coupled receptor kinase(GRK). Cell division cycle protein kinase(CDC2). Abl Protein Tyrosine Kinase(Abl). Proto-oncogene tyrosine-protein kinase FGR(Fgr). With questions or comments.

5

KinasePhos 2.0

http://kinasephos2.mbc.nctu.edu.tw/case3.html

Paste a single sequence or several sequences in FASTA. Format into the field below:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). MAP kinase-activated protein kinase 2(MAPKAPK2). G protein-coupled receptor kinase(GRK). Cell division cycle protein kinase(CDC2). Abl Protein Tyrosine Kinase(Abl). Proto-oncogene tyrosine-protein kinase FGR(Fgr). Hepatocyte growth factor receptor(MET). Proto-oncogene tyrosine-protein kinase FYN(Fyn).

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csb.cse.yzu.edu.tw

ViralPhos

http://csb.cse.yzu.edu.tw/ViralPhos

Is a web server for. Identifying potential virus phosphorylation sites with substrate motifs. 329 experimentally verified phosphorylation fragments on 111 virus proteins were collected from virPTM. And GPS 2.1.

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Is to computationally predict phosphorylation sites within given protein sequences. The known phosphorylation sites are categorized by substrate sequences and their corresponding protein kinase classes. Profile Hidden Markov Model (HMM). HD Huang*, T.Y. Lee, S.W. Tseng, and J.T. Horng. (2005) "KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites" Nucleic Acids Research, Vol. 33, W226-229. [PubMed]. CP1BB HUMAN, Platelet glycoprotein Ib beta chain [Precursor]. Bid Lab, Inst...

kinasephos2.mbc.nctu.edu.tw

KinasePhos 2.0

Version of kinase-specific phosphorylation site prediction tool that is based the sequenece-based amino acid coupling-pattern analysis and solvent accessibility as new features of SVM (support vector machine). Paste a single sequence or several sequences in FASTA. Format into the field below:. Submit a file ( 2MB) in FASTA. Format directly from your local disk:. G protein-coupled receptor kinase(GRK). I kappa B kinase(IKK). Cell division cycle protein kinase(CDC2). G protein-coupled receptor kinase(GRK).

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