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Procleave: in silico identification of protease substrate cleavage sites

Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

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Procleave: in silico identification of protease substrate cleavage sites | lightning.med.monash.edu.au Reviews

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Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

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Procleave: in silico identification of protease substrate cleavage sites | lightning.med.monash.edu.au Reviews

https://lightning.med.monash.edu.au

Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

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Procleave: in silico identification of protease substrate cleavage sites

http://lightning.med.monash.edu.au/index.html

Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

2

Procleave: in silico identification of protease substrate cleavage sites

http://lightning.med.monash.edu.au/webserver.html

Identification of protease-specific substrate cleavage sites. Input the substrate sequence ( O43390 nMANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVL...

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Procleave: in silico identification of protease substrate cleavage sites

http://lightning.med.monash.edu.au/help.html

Identification of protease-specific substrate cleavage sites. Procleave is an online prediction webserver for the computational identification of substrate cleavage sites of caspases from substrate primary sequences. Procleave is freely accessible at http:/ sunflower.kuicr.kyoto-u.ac.jp/ sjn/Procleave/. We extracted four types of sequence profiles based on the bi-profile Bayesian feature extraction approach: (1) bi-profile Bayesian amino acid profile (BPBAA); (2) bi-profile Bayesian secondary structure p...

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Procleave: in silico identification of protease substrate cleavage sites

http://lightning.med.monash.edu.au/links.html

Identification of protease-specific substrate cleavage sites. This collection of links summarizes previously developed computational tools focusing on caspase substrate cleavage predictions. These tools can be online webservers that can be employed to make predictions about caspase cleavage sites by submitting query substrate sequences, or websites that offers standalone softwares for users to download. SVM approach for predicting caspase substrate cleavage sites using binary sequence encoding.

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Procleave: in silico identification of protease substrate cleavage sites

http://lightning.med.monash.edu.au/database.html

Identification of protease-specific substrate cleavage sites. Protease-specific Substrate Database and Supplementary Files. The curated caspase substrate dataset and other supplementary materials for this study can be downloaded at the following links:. Caspase substrate database used for the 5-fold cross-validation and leave-one-out cross-validation (LOOCV)tests. For each entry (starting with ). 1 The first line denotes the Uniprot ID;. 3 The third line denotes the FASTA forma of the substrate sequence;.

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lightning.med.monash.edu

Procleave: in silico identification of protease substrate cleavage sites

Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

lightning.med.monash.edu.au

Procleave: in silico identification of protease substrate cleavage sites

Identification of protease-specific substrate cleavage sites. It is anticipated that Procleave. Will be useful for preliminary screening of putative caspase substrates, the identification of potential cleavage sites, as well as providing new insights for a better understanding of the caspase-substrate interaction relationships. Department of Biochemistry and Molecular Biology, Faculty of Medicine.

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