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molecularevolution.org | molecularevolution.org

Skip to main content. This web site provides web services for software commonly used in molecular evolutionary analyses, including GARLI. You can run these programs on our grid resources using the web services available on this site. We also provide links to other documentation and resources. Maintained by Adam Bazinet. Direct questions and comments to Michael P. ********.

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molecularevolution.org | molecularevolution.org | molevol.lysine.umiacs.umd.edu Reviews
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Skip to main content. This web site provides web services for software commonly used in molecular evolutionary analyses, including GARLI. You can run these programs on our grid resources using the web services available on this site. We also provide links to other documentation and resources. Maintained by Adam Bazinet. Direct questions and comments to Michael P. ********.
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1 molecularevolution org
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7 file manager
8 file format conversion
9 file formats
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molecularevolution.org | molecularevolution.org | molevol.lysine.umiacs.umd.edu Reviews

https://molevol.lysine.umiacs.umd.edu

Skip to main content. This web site provides web services for software commonly used in molecular evolutionary analyses, including GARLI. You can run these programs on our grid resources using the web services available on this site. We also provide links to other documentation and resources. Maintained by Adam Bazinet. Direct questions and comments to Michael P. ********.

INTERNAL PAGES

molevol.lysine.umiacs.umd.edu molevol.lysine.umiacs.umd.edu
1

GARLI Web Service | molecularevolution.org

http://molevol.lysine.umiacs.umd.edu/garli

Skip to main content. Here we provide a web service for GARLI. Version 2.1, a maximum-likelihood phylogenetic analysis program developed and maintained by Derrick Zwickl. GARLI analyses submitted through this web interface run on a grid system at the University of Maryland known as The Lattice Project. If you would like to participate by running these GARLI analyses on your own computing resources, please connect to our BOINC project. An adaptive best tree search, which automatically determines the requi...

2

File Format Conversion | molecularevolution.org

http://molevol.lysine.umiacs.umd.edu/resources/fileformats/converting

Skip to main content. Having the proper data file format is essential as many programs can only input certain file types. The following are some of the input and output file formats for specific programs. Programs that input this file type: Clustal W. Programs that output this file type: Clustal W. Programs that input this file type: Clustal W. Programs that output this file type: Clustal W. Programs that input this file type: BEAUti. Programs that output this file type: Clustal W.

3

GSI Web Service | molecularevolution.org

http://molevol.lysine.umiacs.umd.edu/gsi

Skip to main content. Quantifies the historical relationships among groups for any genealogy to enable novel insight into the evolutionary process. It is intuitive, simple, and easily calculated. The software that calculates the genealogical sorting index and measures its significance is made freely available. Here we provide a web service for GSI version 0.92. GSI analyses submitted through this web interface run on a grid system at the University of Maryland known as The Lattice Project.

4

User account | molecularevolution.org

http://molevol.lysine.umiacs.umd.edu/user/password

Skip to main content. Username or e-mail address: *. Maintained by Adam Bazinet. Direct questions and comments to Adam Bazinet.

5

File Formats | molecularevolution.org

http://molevol.lysine.umiacs.umd.edu/resources/fileformats

Skip to main content. This page serves as a simple reference on file formats commonly used by sequence analysis programs. Each entry is accompanied by properly formatted DNA and amino acid sequences where appropriate. Abstract Syntax Notation 1 form, the computer-readable form of the data used by NCBI. All databases entries are available from Entrez in this format. EMBL is the nucleotide database of EBI. UniProt is the collaborative amino acid database of EBI, SIB and PIR. Example GenBank DNA file ( view.

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molecularevolution.org | molecularevolution.org

Skip to main content. This web site provides web services for software commonly used in molecular evolutionary analyses, including GARLI. You can run these programs on our grid resources using the web services available on this site. We also provide links to other documentation and resources. Maintained by Adam Bazinet. Direct questions and comments to Michael P. Cummings.

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