phos3d.mpimp-golm.mpg.de
Phosphorylation site prediction based on 3D structure
Phos3D: Phosphorylation site prediction from spatial context. Upload a protein structure file (PDB-format):. Please cite the following reference if you use Phos3D for your work. Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, and Dirk Walther. Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction. BMC Bioinformatics 2009, 10:117 doi:10.1186/1471-2105-10-117.
metagenealyse.mpimp-golm.mpg.de
MetaGeneAlyse
Analysis of gene expression/metabolite data. Carsten Daub, Sebastian Kloska, and Joachim Selbig. Bioinformatics - Central Infrastructure Group. Within this system you are able to upload a dataset containing gene expression and/or metabolite data. Each uploaded dataset is assigned an 8-digit ID. This file ID is used to access your dataset for analysis. The k-means clustering algorithm can also be applied to the uploaded dataset.
bioinformatics.mpimp-golm.mpg.de
Bioinformatics Team at the MPI of Molecular Plant Physiology — Bioinformatics
Only in current section. Research Projects, Publications. Bioinformatics Team at the MPI of Molecular Plant Physiology. Welcome to the Bioinformatics Team at the MPI of Molecular Plant Physiology. Bioinformatics group of the University Potsdam. Bioinformatics Support Services of the Max Planck Society. Research Projects, Publications. MPI of Molecular Plant Physiology. March 2018 ». 2000-2018 by the Plone Foundation. And friends. Distributed under the GNU GPL license. Powered by Plone and Python.
aranet.mpimp-golm.mpg.de
PlaNet - Home
Welcome to PlaNet, a platform of web-tools dedicated to visualization and analysis of co-function networks of photosynthetic organisms. Please visit the Help section for introduction to the concepts of the PlaNet platform. To start using PlaNet, search the gene, cluster of genes or Mapman terms of interest using the options below. 1) Search the gene of interest by typing in gene identifier (e.g. Bradi3g50570, At3g03050) or keyword (e.g. kinase) into the box below. These tools are useful for:.
chlamyto.mpimp-golm.mpg.de
ChlamyCyc
This site provides information and resources related to the green alga Chlamydomonas reinhardtii. Browse and search pathways, reactions, compounds, proteins, genes, RNAs, . of Chlamydomonas reinhardtii. Detailed view of the Chlamydomonas reinhardtii. Nuclear, plastid, and mitochondrial genomes and their annotation as well as their EST and peptide coverage. Overview graph of all currently annotated pathways and reactions of Chlamydomonas reinhardtii. In the ChlamyCyc database. Download all sequence and an...
xeml.mpimp-golm.mpg.de
The home of XEML Lab
Monday, April 10, 2017. Welcome to the home of XEML Lab. Welcome to our XEML Lab site! XEML Lab has been created to assist plant biologists in designing and documenting simple or sophisticated experiments in a machine readable format, to link this metadata with any type of data generated in the corresponding experiments, and ultimately, to make both metadata and data available for data mining. This first version of XEML Lab consists of a. A first working draft of an. XiD for XEML Interactive Designer.
grapple.mpimp-golm.mpg.de
GraPPLE
Graph Property based Predictor and Likelihood Estimator. Liam Childs, Zoran Nikoloski, Patrick May, Dirk Walther. Enter sequence (FASTA or raw):. Middot; childs (at) mpimp (dash) golm (dot) mpg (dot) de.
gmd.mpimp-golm.mpg.de
GMD - the Golm Metabolome Database
The GMD web site use latest HTML5 features! This message indicates backward compatibility problems in GMD's mass spectra, chemical compound structure and metabolite profile visualizations. As your browser does not support the HTML5. Element, please consider to upgrade to a HTML5 ready web browser, including Microsoft Internet Explorer, Mozilla Firefox, Apple Safari, Google Chrome and Opera, to fully enjoy GMD's functionalities! Click drag; export. Format; view png image. The Golm Metabolome Database.
chlamycyc.mpimp-golm.mpg.de
ChlamyCyc
A new version of ChlamyCyc (ChlamyCyc 2.0) has been developed by the Carnegie Institute for Science as part of the Plant Metabolic Network (PMN). Follow this link to access ChlamyCyc 2.0:. Http:/ pmn.plantcyc.org/CHLAMY/class-tree? To access ChlamyCyc 1.0 developed by the Max Planck Institute for Molecular Plant Physiology, please go here:. Http:/ chlamyto.mpimp-golm.mpg.de/chlamycyc/index.jsp. Chlamycyc team at MPI-MP. September 10, 2012.
chlamypw.mpimp-golm.mpg.de
Pathway Tools Query Page
Keep me logged in. Why Create an Account? ChlamyCyc accounts provide several benefits. Through your ChlamyCyc account you can:. Customize the appearance of ChlamyCyc pages. Store organism sets for comparative operations. Configure default settings for the Omics Viewers. Receive important email updates about ChlamyCyc. Pathway Tools Query Page. This form provides several different mechanisms for querying Pathway/Genome Databases. Oryza sativa Japonica Group. Synechocystis sp. PCC 6803 COL. SRI Internation...