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Mooney Lab - MutDB Home

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. MutDB - A database for assessing the impact of genetic variants. Browse by First Letter of Gene Symbols. An identifier can be gene symbol, protein or transcript RefSeq, dbSNP, SwissVar, or COSMOC identifiers. Search by Keywords (Not implemented yet). Enter Keywords (like: Disease-name). MutPred scores and hypothesis. In Silico Functional Profiling.

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Sean Mooney

725 Co●●●●●●ve #15

San ●●●●isco , California, 94131

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Sean Mooney

725 Co●●●●●●ve #15

San ●●●●isco , California, 94131

US

1.41●●●●5909
mo●●●●@smi.stanford.edu

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Sean Mooney

725 Co●●●●●●ve #15

San ●●●●isco , California, 94131

US

1.41●●●●5909
mo●●●●@smi.stanford.edu

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Mooney Lab - MutDB Home | mutdb.org Reviews
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Mooney Lab - MutDB Home | mutdb.org Reviews

https://mutdb.org

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. MutDB - A database for assessing the impact of genetic variants. Browse by First Letter of Gene Symbols. An identifier can be gene symbol, protein or transcript RefSeq, dbSNP, SwissVar, or COSMOC identifiers. Search by Keywords (Not implemented yet). Enter Keywords (like: Disease-name). MutPred scores and hypothesis. In Silico Functional Profiling.

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mutpred.mutdb.org mutpred.mutdb.org

MutPred2: a predictor of impactful missense variants

Predict the pathogenicity of amino acid substitutions and their molecular mechanisms. MutPred2 is a standalone and web application developed to classify amino acid substitutions as pathogenic or benign in human. In addition, it predicts their impact on over 50 different protein properties and, thus, enables the inference of molecular mechanisms of pathogenicity. The original MutPred. Web application can still be accessed here. For frameshift and stop-gain variants. We have developed MutPred Splice. Pleas...

INTERNAL PAGES

mutdb.org mutdb.org
1

Mooney Lab - MutDB gene browse T1*-TY*

http://www.mutdb.org/genes/browse/letter:T/start:1/end:Z

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. Genes T1* - TY*. Trace amine-associated receptor 1 [Homo sapiens]. Trace amine-associated receptor 2 isoform 1. Trace amine-associated receptor 2 isoform 2. Trace amine-associated receptor 5 [Homo sapiens]. Trace amine-associated receptor 6 [Homo sapiens]. Trace amine-associated receptor 8 [Homo sapiens]. Trace amine-associated receptor 9. TGF-beta-activated kinase 1 and MAP3K7-binding pro. Transforming acidic coi...

2

Mooney Lab - MutDB gene browse S1*-SY*

http://www.mutdb.org/genes/browse/letter:S/start:1/end:Z

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. Genes S1* - SY*. Protein S100-A5 [Homo sapiens]. Protein S100-A7-like 2 [Homo sapiens]. S100P-binding protein isoform b [Homo sapiens]. S100P-binding protein isoform a. Protein S100-Z [Homo sapiens]. Sphingosine 1-phosphate receptor 1. Sphingosine 1-phosphate receptor 2 [Homo sapiens]. Sphingosine 1-phosphate receptor 3. Sphingosine 1-phosphate receptor 4 precursor [Homo. Sphingosine 1-phosphate receptor 5.

3

Mooney Lab - MutDB gene browse C1*-CY*

http://www.mutdb.org/genes/browse/letter:C/start:1/end:Z

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. Genes C1* - CY*. Uncharacterized protein C10orf105 [Homo sapiens]. Uncharacterized protein C10orf105 [Homo sapiens]. Leucine-rich repeat-containing protein C10orf11 [H. Putative uncharacterized protein C10orf114 [Homo s. Adipose most abundant gene transcript 2 protein [H. Uncharacterized protein C10orf120 [Homo sapiens]. Putative uncharacterized protein C10orf122 [Homo s. Fucose mutarotase isoform 1 [Homo sapiens].

4

Mooney Lab - MutDB gene browse K1*-KY*

http://www.mutdb.org/genes/browse/letter:K/start:1/end:Z

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. Genes K1* - KY*. KN motif and ankyrin repeat domain-containing prot. KN motif and ankyrin repeat domain-containing prot. KN motif and ankyrin repeat domain-containing prot. KN motif and ankyrin repeat domain-containing prot. KN motif and ankyrin repeat domain-containing prot. KN motif and ankyrin repeat domain-containing prot. KAT8 regulatory NSL complex subunit 1 isoform 2. KAT8 regulatory NSL complex subunit 2.

5

Mooney Lab - MutDB gene browse D1*-DY*

http://www.mutdb.org/genes/browse/letter:D/start:1/end:Z

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. Genes D1* - DY*. D-2-hydroxyglutarate dehydrogenase, mitochondrial. Neuron-specific protein family member 1. Neuron-specific protein family member 1. Disheveled-associated activator of morphogenesis 1. Disheveled-associated activator of morphogenesis 2. Disheveled-associated activator of morphogenesis 2. Disabled homolog 2 isoform 1. Disabled homolog 2-interacting protein isoform 1. Dachshund homolog 1 isoform c.

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mutpred.mutdb.org mutpred.mutdb.org

MutPred Server

http://mutpred.mutdb.org/view.html

Sean Mooney Lab Home. Predrag Radivojac Lab Home. In order to retrieve the information please enter the Job ID in the field below. In Silico Functional Profiling. Last modified: Tue Apr 19 19:02:47 EDT 2011.

mutpred.mutdb.org mutpred.mutdb.org

MutPred Server

http://mutpred.mutdb.org/about.html

Sean Mooney Lab Home. Predrag Radivojac Lab Home. How do I interpret the results? The output of MutPred contains a general score ( g. Ie, the probability that the amino acid substitution is deleterious/disease-associated, and top 5 property scores ( p. Is the P-value that certain structural and functional properties are impacted. Certain combinations of high values of general scores and low values of property scores are referred to as hypotheses. 005 are referred to as actionable hypotheses. 2009) The Hu...

bioinformatication.blogspot.com bioinformatication.blogspot.com

bioinformatics: DNA annotations

http://bioinformatication.blogspot.com/2007/06/dna-annotations_13.html

Wednesday, June 13, 2007. Apollo Genome Annotation and Curation Tool. Apollo is a genome annotation viewer and editor. Apollo allows researchers to explore genomic annotations at many levels of detail, and to perform expert annotation curation, all in a graphical environment. DNA sequence viewer and annotation tool; allows visualization of sequence features and results of analyses within the context of the sequence and its 6-frame translation; available for UNIX, Windows and Macintosh. The BRIDGE-based G...

bioinformatication.blogspot.com bioinformatication.blogspot.com

bioinformatics: DNA annotations

http://bioinformatication.blogspot.com/2007/06/dna-annotations.html

Wednesday, June 13, 2007. Apollo Genome Annotation and Curation Tool. Apollo is a genome annotation viewer and editor. Apollo allows researchers to explore genomic annotations at many levels of detail, and to perform expert annotation curation, all in a graphical environment. DNA sequence viewer and annotation tool; allows visualization of sequence features and results of analyses within the context of the sequence and its 6-frame translation; available for UNIX, Windows and Macintosh. The BRIDGE-based G...

mutpred.mutdb.org mutpred.mutdb.org

The MutPred Server

http://mutpred.mutdb.org/index.html

Sean Mooney Lab Home. Predrag Radivojac Lab Home. If you would like to run MutPred on more than 100 amino acid substitutions, please contact Prof. Predrag Radivojac. Wildtype AA sequence :. Enter a protein sequence in FASTA. Format using single letter amino acid symbols). Enter the mutations separated by commas. e.g., A120V, M1V, I369L). All fields are mandatory *. In Silico Functional Profiling. Last modified: Sun Feb 02 23:21:06 PST 2014.

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Mooney Lab - MutDB Home

Click to read more." target=" blank". Click to read more." target=" blank" Mooney Lab Home. MutDB - A database for assessing the impact of genetic variants. Browse by First Letter of Gene Symbols. An identifier can be gene symbol, protein or transcript RefSeq, dbSNP, SwissVar, or COSMOC identifiers. Search by Keywords (Not implemented yet). Enter Keywords (like: Disease-name). MutPred scores and hypothesis. In Silico Functional Profiling.

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