netaligner.irbbarcelona.org
NetAligner - fast and accurate alignment of protein interaction networksAligns protein complexes, pathways and interaction networks of arbitrary topology.
http://netaligner.irbbarcelona.org/
Aligns protein complexes, pathways and interaction networks of arbitrary topology.
http://netaligner.irbbarcelona.org/
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NetAligner - fast and accurate alignment of protein interaction networks | netaligner.irbbarcelona.org Reviews
https://netaligner.irbbarcelona.org
Aligns protein complexes, pathways and interaction networks of arbitrary topology.
netaligner.irbbarcelona.org
NetAligner - fast and accurate alignment of protein interaction networks
http://netaligner.irbbarcelona.org/complex_to_interactome.html
Fast and accurate alignment of protein interaction networks. Complex to interactome alignment. Here you can align a query complex of one organism to the whole interactome of another species. 1) Please choose the query and target species:. 2) Please enter the UniProt. ACs of the protein components of the given complex comma-, whitespace- or newline-separated, e.g. for human vs. yeast:. P49642,P49643,Q14181,P09884. 3) Please enter the NetAligner parameters. Or click submit to use the default ones:.
NetAligner - fast and accurate alignment of protein interaction networks
http://netaligner.irbbarcelona.org/interactome_to_interactome.html
Fast and accurate alignment of protein interaction networks. Interactome to interactome alignment. Here you can align whole species interactomes in search of conserved complexes or higher-order assemblies. 1) Please choose the query and target species:. 2) Please enter the NetAligner parameters. Or click submit to use the default ones for finding conserved protein complexes:. Predict likely conserved interactions:. Vertex probability threshold [0-1]:. Edge probability threshold [0-1]:.
NetAligner - fast and accurate alignment of protein interaction networks
http://netaligner.irbbarcelona.org/help.html
Fast and accurate alignment of protein interaction networks. NetAligner features fast complex to interactome. And interactome to interactome. Alignment, respecting one-to-many and many-to-many homology relationships. For full functionality of the webserver, please enable Javascript and Flash support in your browser. Complex to interactome alignment. Pathway to interactome alignment. Interactome to interactome alignment. The alignment graph is then extended by connecting vertices of different seeds throug...
NetAligner - fast and accurate alignment of protein interaction networks
http://netaligner.irbbarcelona.org/cgi-bin/jobs.py
Fast and accurate alignment of protein interaction networks. Last jobs submitted. Cookies should be enabled in your browser for NetAligner web server to save/display the jobs. The results of the jobs submitted are deleted after 48 hours. Predict likely conserved interactions. For questions about the NetAligner algorithm or the web server, please send an email to netaligner@irbbarcelona.org.
NetAligner - fast and accurate alignment of protein interaction networks
http://netaligner.irbbarcelona.org/pathway_to_interactome.html
Fast and accurate alignment of protein interaction networks. Pathway to interactome alignment. Here you can align a query pathway of one organism to the whole interactome of another species. 1) Please choose the query and target species:. 2) Please enter the individual protein-protein interactions of the given pathway one interaction per line, with whitespace-separated UniProt. Q8INB9 Q9VEZ5 0.9. P91634 Q8INB9 0.9. M9PAY7 Q8INB9 0.9. 3) Please enter the NetAligner parameters.
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Resources | Structural Bioinformatics and Network Biology Group
http://sbnb.irbbarcelona.org/resources
Skip to main content. Our webservers and other resources. The database of three-dimensional interacting domains. 3did) is a collection of protein interactions for which high-resolution three-dimensional structures. Are known. 3did exploits the a availability of structural data to provide molecular details on interactions between two globular domains as well as novel domain peptide interactions. The complex nature of biological systems requires intricate networks of protein-protein interactions that coord...
ANTIPATHOGN
http://www.antipathogn.eu/tools.asp
AntiPathoGN @ AEROPATH kick-off meeting. AntiPathoGN @ CAREPNEUMO kick-off meeting. AntiPathoGN @ XIII Reunion de la SEIMC. AntiPathoGN @ Conference on New Frontiers in Microbiology and Infection (CNFMI). AntiPathoGN featured in a 2010 Calendar of the European Commission. AntiPathoGN @ 20th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID). AntiathoGN @ International Conference on Antimicrobial Research (ICAR2010). AntiPathoGN @ UNIA Workshop. AntiPathoGN @ EMBO Conference Series.
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NetAligner - fast and accurate alignment of protein interaction networks
Fast and accurate alignment of protein interaction networks. We currently provide complex to interactome. And interactome to interactome. Alignment for all species combinations of H. sapiens, M. musculus, D. melanogaster, C. elegans, A. thaliana, S. Cerevisiae. Please cite the following publications:. Pache RA, Céol A, Aloy P. NetAligner A network alignment server to compare complexes, pathways and whole interactomes. Nucleic Acids Res. 2012 PMID: 22618871.
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