npjoint.com

Cocoa annotator demo

Compact cover annotator for biological noun phrases. Cocoa is a dense annotator for biological text. It annotates macromolecules, chemicals, protein/DNA parts, complexes, organisms, processes, anatomical parts, locations, physiological terms, parameters, values, experimental techniques, surgical procedures, and foods. The dense annotation cover should suffice to jumpstart a semantic frame -based relation annotator. Enter some text below, try the sample data, or look at some pre-annotated corpora.

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Cocoa annotator demo | npjoint.com Reviews

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Compact cover annotator for biological noun phrases. Cocoa is a dense annotator for biological text. It annotates macromolecules, chemicals, protein/DNA parts, complexes, organisms, processes, anatomical parts, locations, physiological terms, parameters, values, experimental techniques, surgical procedures, and foods. The dense annotation cover should suffice to jumpstart a semantic frame -based relation annotator. Enter some text below, try the sample data, or look at some pre-annotated corpora.

<META> KEYWORDS

1 about cocoa

2 webapi

3 feedback

4 cocoa

5 genia

6 brat

7 instructions here

8 terms of use

9 coupons

10 reviews

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Cocoa annotator demo | npjoint.com Reviews

https://npjoint.com

Compact cover annotator for biological noun phrases. Cocoa is a dense annotator for biological text. It annotates macromolecules, chemicals, protein/DNA parts, complexes, organisms, processes, anatomical parts, locations, physiological terms, parameters, values, experimental techniques, surgical procedures, and foods. The dense annotation cover should suffice to jumpstart a semantic frame -based relation annotator. Enter some text below, try the sample data, or look at some pre-annotated corpora.

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relagent.com

RelAgent Technologies | Products | Cocoa

http://www.relagent.com/Products/Cocoa.html

Cocoa is a dense annotator for biological text. It annotates:. N(omega)-nitro-L-arginine methyl ester (L-NAME). Protein/DNA parts, mutations:. Food: e.g.,. Habitats: e.g.,. Institutions: e.g.,. Profession(al)s: e.g.,. Cocoa provides annotations for nested entities (. In the disease term. As well as fine grained subcategorization of anatomical entities, diseases and organisms through an extended annotation interface. You can try an online demo.

relagent.com

RelAgent Technologies | Products | Peaberry

http://www.relagent.com/Products/Peaberry.html

Peaberry is a dense event annotator for biological text (more to come).

relagent.com

RelAgent Technologies | Technology

http://www.relagent.com/Tech.html

Our text processing is based on linguistic techniques, including morphological clues for entity identification, and parsers and semantic event mappers for event detection developed in-house and optimized for the biomedical domain. We supplement grammatical techniques with machine learning methods when advantageous. Some publications describing our technology:. We participated in the BioNLP-ST Cancer Genetics shared task on event extraction with moderate results.

relagent.com

RelAgent Technologies | Products

http://www.relagent.com/Products.html

We currently have two products, one (Cocoa) in production, and one in beta (Peaberry). Cocoa is a dense annotator for biological text. It annotates macromolecules, chemicals, protein/DNA parts, complexes, organisms, processes, anatomical parts, locations, physiological terms, parameters, values, experimental techniques, surgical procedures, and foods. Peaberry is a dense frame-based event annotator for biological text.

relagent.com

RelAgent Technologies | Technology

http://www.relagent.com/Corpora.html

The literature on ion channels thus offers a challenge to text mining systems that extract quantitative data from the literature. In this note, we describe an ion channel corpus annotated with channel activities, channel regulation events, and associated parameters and their values. The Chennai Quantitative Kir (CheQK) Corpus consists of 105 MEDLINE abstracts on the inward rectifying potassium channel (Kir) family which have been annotated for quantitative relations. Some examples:. Wittig U, Kania R, Go...

relagent.com

RelAgent Technologies

http://www.relagent.com/index.html

RelAgent enables discovery of connections between objects across multiple documents. Currently, RelAgent has two products for intra-document discovery: Cocoa, a recognition engine for objects that occur in a document, and Peaberry, a tool for discovery of connections between objects also inside a single document.

2013.bionlp-st.org

Supporting Resources - BioNLP-ST 2013

http://2013.bionlp-st.org/supporting-resources

BMC Bioinformatics special issue. This section describes the supporting resources that are available for the shared task. The files to be downloaded can be found at the bottom of the page. Attempts to the address the BioCreative IV interoperability track. BioNLP ST 2013 participants with tokenisation, lemmatisation, sentence splitting, chunking and PoS-tagging in a unified BioC XML format to jump-start event extraction efforts. An open-source lemmatiser specifically tailored for biomedical texts. Haibin ...

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npjoint.com

Cocoa annotator demo

Compact cover annotator for biological noun phrases. Cocoa is a dense annotator for biological text. It annotates macromolecules, chemicals, protein/DNA parts, complexes, organisms, processes, anatomical parts, locations, physiological terms, parameters, values, experimental techniques, surgical procedures, and foods. The dense annotation cover should suffice to jumpstart a semantic frame -based relation annotator. Enter some text below, try the sample data, or look at some pre-annotated corpora.

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