nypg.bio.nyu.edu

The New York Plant Genomics Consortium

The New York Plant Genomics Consortium. The New York Plant Genomics Consortium is an inter-institutional collaboration scheme combining the expertise of scientists from four research/educational institutions specializing in evolution and genomics: New York University, The New York Botanical Garden, the American Museum of Natural History, and Cold Spring Harbor Laboratory. We receive funding from the U.S. National Science Foundation grant Comparative Genomics of Seed Evolution. NYU, Department of Biology.

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The New York Plant Genomics Consortium | nypg.bio.nyu.edu Reviews

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The New York Plant Genomics Consortium. The New York Plant Genomics Consortium is an inter-institutional collaboration scheme combining the expertise of scientists from four research/educational institutions specializing in evolution and genomics: New York University, The New York Botanical Garden, the American Museum of Natural History, and Cold Spring Harbor Laboratory. We receive funding from the U.S. National Science Foundation grant Comparative Genomics of Seed Evolution. NYU, Department of Biology.

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2 funding

3 people

4 tools

5 publications

6 data

7 bigplant v1

8 and plant biology

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The New York Plant Genomics Consortium | nypg.bio.nyu.edu Reviews

https://nypg.bio.nyu.edu

The New York Plant Genomics Consortium. The New York Plant Genomics Consortium is an inter-institutional collaboration scheme combining the expertise of scientists from four research/educational institutions specializing in evolution and genomics: New York University, The New York Botanical Garden, the American Museum of Natural History, and Cold Spring Harbor Laboratory. We receive funding from the U.S. National Science Foundation grant Comparative Genomics of Seed Evolution. NYU, Department of Biology.

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nypg.bio.nyu.edu

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Funding « The New York Plant Genomics Consortium

http://nypg.bio.nyu.edu/main/funding

The New York Plant Genomics Consortium. National Science Foundation Plant Genome Grant #0922738. 8220;Genomics of Comparative Seed Evolution” 2010-2014. National Science Foundation Plant Genome Grant #0421604. 8220;Genomics of Comparative Seed Evolution” 2004-2010. National Science Foundation Plant Genome Grant #0346436. 8220;SGER Grant: Plant Evolutionary Genomics: Develop and Test Bioinformatic Tools to Automate Ortholog Identification for Phylogenomics and Functional Genomic Studies” 2003-2004.

2

People « The New York Plant Genomics Consortium

http://nypg.bio.nyu.edu/main/people

The New York Plant Genomics Consortium. W Richard McCombie (CSHL). Dennis Wm. Stevenson (NYBG). Bioinformatics Manager, Software. Manpreet S. Katari (NYU). Bioinformatics Manager, Data. Angelica Cibrian-Jaramillo (LaNGeBio/NYBG/AMNH) ,. Sergios-Orestis Kolokotronis (Fordham/AMNH) ,. Discuss on our WP Forum.

3

Data « The New York Plant Genomics Consortium

http://nypg.bio.nyu.edu/main/data

The New York Plant Genomics Consortium. With alignment and trees. CDNA Illumina reads ( SRX022254. De la Torre-Bárcena et al. (2009,. Amino acid alignment; ML tree ( Newick format. De la Torre et al. (2006,. Amino acid alignment; MP tree (Newick format, PDF graphic. Site structure undergoing update…. Discuss on our WP Forum.

4

Tools « The New York Plant Genomics Consortium

http://nypg.bio.nyu.edu/main/tools

The New York Plant Genomics Consortium. Discuss on our WP Forum.

5

BigPlant

http://nypg.bio.nyu.edu/bp

Project uses a phylogenomic approach to produce a high resolution phylogeny of the seed plants. The current seed plant matrix comprises 150 species (including 5 outgroup taxa) and over 10 million aminoacid characters from more than 22,000 genes. NEW* Tree and support Visualization PhyloBrowser. The BIGPLANT v1 phylogenetic matrix is available. This project is supported by the National Science Foundation Plant Genome Grant #0922738. 12/15/2011 - The BigPlant paper. Is published in PLoS Genetics (.

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coruzzilab.bio.nyu.edu

Coruzzi Lab | Coruzzi Lab

http://coruzzilab.bio.nyu.edu/wordpress

New York University’s Center for Genomics and Systems Biology. Plant Systems Biology @ The Coruzzi Lab. From predictive network modeling to trait evolution. For information on joining the Coruzzi Lab, please visit our Career Opportunities. Http:/ nypg.bio.nyu.edu/bp/. A community resource and phylogenomic analysis of 150 seed plant genomes that enables researchers to explore the genomic origins of plant diversification across a wide range of species and questions in plant biology. Our projects in Plant S...

desalle.amnh.org

Rob DeSalle at the American Museum of Natural History

http://desalle.amnh.org/cv.html

1984 - PhD in Biology, Washington University, St. Louis, MO. 1976 - BA in Biological Sciences, University of Chicago, Chicago, IL. Since 1999: American Museum of Natural History, Curator of Entomology. 1993-1999: American Museum of Natural History, Associate Curator of Entomology. 1991-1993: American Museum of Natural History, Assistant Curator of Entomology. 1986-1991: Yale University, Department of Biology, Assistant Professor. 1979-1984: Washington University, Doctoral Student (Advisor: Alan Templeton).

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The New York Plant Genomics Consortium. The New York Plant Genomics Consortium is an inter-institutional collaboration scheme combining the expertise of scientists from four research/educational institutions specializing in evolution and genomics: New York University, The New York Botanical Garden, the American Museum of Natural History, and Cold Spring Harbor Laboratory. We receive funding from the U.S. National Science Foundation grant Comparative Genomics of Seed Evolution. NYU, Department of Biology.

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