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The ORYZA Map Alignment Project (OMAP) - Home

The long term goal of this project is to develop an experimentally tractable and closed model system to globally unravel and understand the evolution, physiology and biochemistry of the genus Oryza. The specific objectives of this proposal are to:. Construct DNA fingerprint/BAC-end sequence physical maps from 11 deep coverage BAC libraries that represent the 11 wild genomes of Oryza (830,000 fingerprints; 1,659,000 BAC ends). This project has been funded by NSF award #: 0321678. Scott A. Jackson.

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The ORYZA Map Alignment Project (OMAP) - Home | omap.org Reviews

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The long term goal of this project is to develop an experimentally tractable and closed model system to globally unravel and understand the evolution, physiology and biochemistry of the genus Oryza. The specific objectives of this proposal are to:. Construct DNA fingerprint/BAC-end sequence physical maps from 11 deep coverage BAC libraries that represent the 11 wild genomes of Oryza (830,000 fingerprints; 1,659,000 BAC ends). This project has been funded by NSF award #: 0321678. Scott A. Jackson.

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2 purdue university

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5 nsf proposal details

6 project status

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The ORYZA Map Alignment Project (OMAP) - Home | omap.org Reviews

https://omap.org

The long term goal of this project is to develop an experimentally tractable and closed model system to globally unravel and understand the evolution, physiology and biochemistry of the genus Oryza. The specific objectives of this proposal are to:. Construct DNA fingerprint/BAC-end sequence physical maps from 11 deep coverage BAC libraries that represent the 11 wild genomes of Oryza (830,000 fingerprints; 1,659,000 BAC ends). This project has been funded by NSF award #: 0321678. Scott A. Jackson.

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omap.org

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The Oryza Map Alignment Project (OMAP) - Project Status

http://www.omap.org/status.html

All institutes participating in this project have Web Pages to display the status of their work. Listed below are links to some of the status Web Pages:. AGI/AGCoL - OMAP BAC Library, BES and FingerPrinting Status. Cold Spring Harbor Lab. Email comments to: mbraidot@ag.arizona.edu.

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oge.gramene.org

Oryza longistaminata - Ensembl

http://oge.gramene.org/Oryza_longistaminata/Info/Index

AA genome type) is a wild rice, Perennial, tall (2 m or more), erect, and rhizomatous grass; ligule of lower leaves 15 mm, acute or 2-cleft; panicles open to intermediately open; spikelets 4.5-11.4 mm long and 2-3 mm wide, awned (2-5 cm long); anther 1.5-8.2 mm long. More information and statistics. More information and statistics. Display your data in Gramene OGE. What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs. More about this genebuild.

oge.gramene.org

Oryza meridionalis - Ensembl

http://oge.gramene.org/Oryza_meridionalis/Info/Index

Genome assembly: Oryza meridionalis v1.3. More information and statistics. Display your data in Gramene OGE. What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs. More about this genebuild. Download genes, cDNAs, ncRNA, proteins - FASTA. Update your old Ensembl IDs. What can I find? Homologues, gene trees, and whole genome alignments across multiple species. More about comparative analyses. Genomic alignments [11] [ Show. Syntenies [10] [ Show.

shennongcenter.org

Shennong Center

http://www.shennongcenter.org/projects.html

Rice chromosomes 3/4 related websites. RGP Physical and Genetic Maps. Gramene: Comparative Mapping Resource for Grains. International Rice Genome Sequencing Project (IRGSP). Constructed by Jianwei Zhang. This site is compatible with most internet browsers which include: IE. 55 (Windows), Firefox. 10 , Mozilla.

brassica.info

brassica.info | BMAP

http://www.brassica.info/resource/sequencing/bmap.php

Fodder brassica - USA. Carleton College online lab. Brassica.info Bulletin (old). Guide to Wild Germplasm. UK plant science federation. Ensembl with Brassica tracks. Brassicales Map Alignment Project (BMAP). These pages have been set up to hold information (including notes from meetings, a list of target species etc.) for the Brassicales Map Alignment Project. BMAP) BMAP is analagous to a similar initiative that has been established for. Jan 2010 ( Minutes of meeting. Wuhan, June 2010 ( Minutes of meeting.

intelliblog.net

A rice genome to feed the world | Intelliblog.net

http://www.intelliblog.net/a-rice-genome-to-feed-the-world

Intelligent discussion on many subects. A rice genome to feed the world. Understanding the complete genome of African rice will enable researchers and agriculturalists to develop new varieties of rice with African rice’s hardiness, making them better able to adapt to conditions of a changing climate. (Credit: International Rice Research Institute). An international team of researchers led by the University of Arizona. UA) has sequenced the complete genome of African rice. The 9 billion-people question.

dev.gramene.org

Oryza meridionalis - Ensembl Genomes

http://dev.gramene.org/Oryza_meridionalis

Oryza meridionalis (Oryza meridionalis v1.3). What's New in Oryza meridionalis release 84. More information and statistics. Genome assembly: Oryza meridionalis v1.3. More information and statistics. Display your data in Ensembl Plants. What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs. More about this genebuild. Download genes, cDNAs, ncRNA, proteins - FASTA. Update your old Ensembl IDs. What can I find? More about comparative analyses.

oryzatagline.cirad.fr

Oryza Tag Line

http://oryzatagline.cirad.fr/links.htm

Rice Adaptative Development Team. IRD rice genomics team. Http:/ umr-bgpi.cirad.fr/index uk.htmUmr BGPI. Génoplante Bioinformatic team. International Rice Research Institute. CIAT: International Center for Tropical Agriculture. OryGenesDb (CIRAD) Reverse Genetics for Rice. T-DNA Rice Insertion lines (Gyn An) Korean T-DNA rice insertion mutants. Rice insertion mutant database,. The Rice Functional Genomics Program (RIFGP), China. Rice Genome Research Program. Tigr Rice genome project. PlantCare Plant ci-a...

oge.gramene.org

Oryza meridionalis - Ensembl

http://oge.gramene.org/Oryza_meridionalis

Genome assembly: Oryza meridionalis v1.3. More information and statistics. Display your data in Gramene OGE. What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs. More about this genebuild. Download genes, cDNAs, ncRNA, proteins - FASTA. Update your old Ensembl IDs. What can I find? Homologues, gene trees, and whole genome alignments across multiple species. More about comparative analyses. Genomic alignments [11] [ Show. Syntenies [10] [ Show.

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omap.org

The ORYZA Map Alignment Project (OMAP) - Home

The long term goal of this project is to develop an experimentally tractable and closed model system to globally unravel and understand the evolution, physiology and biochemistry of the genus Oryza. The specific objectives of this proposal are to:. Construct DNA fingerprint/BAC-end sequence physical maps from 11 deep coverage BAC libraries that represent the 11 wild genomes of Oryza (830,000 fingerprints; 1,659,000 BAC ends). This project has been funded by NSF award #: 0321678. Scott A. Jackson.

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