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OntoGeek | Ramblings of an ontology geek

Ramblings of an ontology geek

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OntoGeek | Ramblings of an ontology geek | ontogeek.wordpress.com Reviews

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Ramblings of an ontology geek

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1

Hello world! | OntoGeek

https://ontogeek.wordpress.com/2010/01/24/hello-world

Ramblings of an ontology geek. January 24, 2010. So, what’s this all about? Pretty cool… but it didn’t always give the right answers, and the answers were very frequently incomplete. So, I got curious about fixing the underlying data structure. And anyway, what does this relation part of really mean? Was it even possible to work with them in any sustainable way? And then there was the way that we edited these files – via a GUI-type editor that was, at the time at least, more than a little bug-ridde...

2

About | OntoGeek

https://ontogeek.wordpress.com/about

Ramblings of an ontology geek. The ramblings of an ontology geek. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. You are commenting using your Twitter account. ( Log Out. You are commenting using your Facebook account. ( Log Out. You are commenting using your Google account. ( Log Out. Notify me of new comments via email. Virtual fly brain is live.

3

Realism, Really? | OntoGeek

https://ontogeek.wordpress.com/2010/04/24/realism-really

Ramblings of an ontology geek. Yes, really. →. April 24, 2010. A major and seemingly endless debate ( feud? Within the ontology world is between those who describe themselves as realists, and those who I’ll call conceptualists (I’m not sure many would use this label, but the people i have in mind are united by a love of the word ‘concept’.). It seems reasonable to me to claim that, if I build an anatomy ontology that can answer the question “What bones are part of normal human arm? But, who can discount ...

4

virtual fly brain is live | OntoGeek

https://ontogeek.wordpress.com/2011/04/05/virtual-fly-brain-is-live

Ramblings of an ontology geek. Gradgrind the ontologist →. Virtual fly brain is live. April 5, 2011. Ontology driven site for exploring fruit fly brains and their neurons:. Http:/ www.virtualflybrain.org. This entry was posted in Uncategorized. Gradgrind the ontologist →. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. Notify me of new comments via email.

5

Gradgrind the ontologist | OntoGeek

https://ontogeek.wordpress.com/2014/03/12/39

Ramblings of an ontology geek. Virtual fly brain is live. 8216;Bitzer,’ said Thomas Gradgrind. ‘Your definition of a horse.’. 8216;Quadruped. Graminivorous. Forty teeth, namely twenty-four grinders, four eye-teeth, and twelve incisive. Sheds coat in the spring; in marshy countries, sheds hoofs, too. Hoofs hard, but requiring to be shod with iron. Age known by marks in mouth.’ Thus (and much more) Bitzer. March 12, 2014. This entry was posted in Uncategorized. Virtual fly brain is live.

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hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: June 2011

http://hymao.blogspot.com/2011_06_01_archive.html

Tuesday, June 28, 2011. What's the Preferred Term - 6/28/2011. Recap from last post: We had a response for both the terms from Burks who suggested "lateral ocellus" and "frontal depression" for the corresponding classes HAO:0000481 and HAO:0000911 respectively. Unless there is consensus against it, we will make the according changes. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/1072. TERM OPTIONS: arthrodial membrane, conjunctiva, corium. If you would like t...

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: April 2011

http://hymao.blogspot.com/2011_04_01_archive.html

Monday, April 25, 2011. What's the Preferred Term - 4/25/2011. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/3937. DEFINITION: The sclerite that is located distally of the gonostipes. TERM OPTIONS: distal segment of gonopod, dististyle, gonoharpe, gonosquama, gonostylus, harpe, harpes, harpide, palette, paramere, squama, telomere. HOMONYM NOTES: "paramere" ( http:/ glossary.hymao.org/projects/32/public/label/show/4259. Have been used for other classes. Recap ...

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: February 2011

http://hymao.blogspot.com/2011_02_01_archive.html

Monday, February 28, 2011. What's the Preferred Term - 2/28/2011. Apologies for missing last week's WTPT post. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/5995. DEFINITION: Mushroom-shaped sensory structure on the flagellum, particularly the clava; sometimes called the sensilla ampullacea. TERM OPTIONS: basiconic capitate peg sensillum, capitate peg sensillum, sensilla ampullacea. TERM OPTIONS: inner male genitalia, internal male genitalia. If you would lik...

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: August 2011

http://hymao.blogspot.com/2011_08_01_archive.html

Friday, August 26, 2011. RCN working group meeting - Boulder, CO. Last June the Phenotype RCN. Organized a set of concurrent working group meetings—focused on arthropod anatomy, vertebrate anatomy, plant phenotypes, and the informatics associated with phenotype data and ontologies—that were very graciously hosted by by Google's office in Boulder. CO The meeting agenda. Are already posted on the Phenotype RCN website, though I noticed today that the arthropod anatomy working group summary never got posted!

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: January 2011

http://hymao.blogspot.com/2011_01_01_archive.html

Monday, January 31, 2011. What's the Preferred Term - 1/31/2011. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/544. DEFINITION: The carina that delimits anterlaterally the mesocoxal depression. TERM OPTIONS: postpectal carina, postpectal flange, precoxal carina of mesopleuron, ventral mesopleural carina. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/4762. ARE THERE terms that we are missing for these concepts?

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: March 2011

http://hymao.blogspot.com/2011_03_01_archive.html

Monday, March 28, 2011. What's the Preferred Term - 3/28/2011. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/535. DEFINITION: The frontal line that is a carina. TERM OPTIONS: central keel, frontal carina. HYMGLOSSARY LINK: http:/ glossary.hymao.org/projects/32/public/ontology class/show expanded/1183. DEFINITION: The depression that is medially located on the scutoscutellar suture. TERM OPTIONS: anterior scutellar pit, scutellar fovea. Monday, March 21, 2011.

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology

http://hymao.blogspot.com/2011/07/recap-from-last-post-for-first-class.html

Monday, July 25, 2011. Recap from last post: For the first class, "HAO:0000889: The area that is located proximally on the scape, is limited distally by a constriction and bears proximally the basal knob" we had no responses, so we will keep "radicle" as the preferred label. Both Fernández-Triana and Jennings suggested "malar sulcus" for the second class - since it is already preferred we will keep that label as it is. TERM OPTIONS: facial pit, fosette scrobale, fossette frontale, pore facial. We will no...

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: July 2011

http://hymao.blogspot.com/2011_07_01_archive.html

Monday, July 25, 2011. Recap from last post: For the first class, "HAO:0000889: The area that is located proximally on the scape, is limited distally by a constriction and bears proximally the basal knob" we had no responses, so we will keep "radicle" as the preferred label. Both Fernández-Triana and Jennings suggested "malar sulcus" for the second class - since it is already preferred we will keep that label as it is. TERM OPTIONS: facial pit, fosette scrobale, fossette frontale, pore facial. We will no...

hymao.blogspot.com hymao.blogspot.com

Hymenoptera Anatomy Ontology: RCN working group meeting - Boulder, CO

http://hymao.blogspot.com/2011/08/rcn-working-group-meeting-boulder-co.html

Friday, August 26, 2011. RCN working group meeting - Boulder, CO. Last June the Phenotype RCN. Organized a set of concurrent working group meetings—focused on arthropod anatomy, vertebrate anatomy, plant phenotypes, and the informatics associated with phenotype data and ontologies—that were very graciously hosted by by Google's office in Boulder. CO The meeting agenda. Are already posted on the Phenotype RCN website, though I noticed today that the arthropod anatomy working group summary never got posted!

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OntoGeek | Ramblings of an ontology geek

Ramblings of an ontology geek. 8216;Bitzer,’ said Thomas Gradgrind. ‘Your definition of a horse.’. 8216;Quadruped. Graminivorous. Forty teeth, namely twenty-four grinders, four eye-teeth, and twelve incisive. Sheds coat in the spring; in marshy countries, sheds hoofs, too. Hoofs hard, but requiring to be shod with iron. Age known by marks in mouth.’ Thus (and much more) Bitzer. 8216;Now girl number twenty,’ said Mr. Gradgrind. ‘You know what a horse is.’. March 12, 2014. Virtual fly brain is live. 8220;M...

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