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Aebersold lab web application server

Aebersold web application server. Find web services developed by the Aebersold lab below. Please find the main lab web page here. Discover crosslinks, xQuest webserver application. Software for the analysis of cross-linked peptides. Software for the quantification of cross-linked peptides. Prediction, Validation and Visualisation of Chemical Cross-Links. Protein Identification False Discovery Rates. Label-free quantification; Latin Square Data. Prediction of Interferences in SRM.

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Aebersold lab web application server | openmrm.org Reviews

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Aebersold web application server. Find web services developed by the Aebersold lab below. Please find the main lab web page here. Discover crosslinks, xQuest webserver application. Software for the analysis of cross-linked peptides. Software for the quantification of cross-linked peptides. Prediction, Validation and Visualisation of Chemical Cross-Links. Protein Identification False Discovery Rates. Label-free quantification; Latin Square Data. Prediction of Interferences in SRM.

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1 services

2 xquest

3 xquest/xprophet

4 xtract

5 xwalk

6 mayu

7 superhirn

8 srmcollider

9 openswath

10 msproteomicstools

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services,xquest,xquest/xprophet,xtract,xwalk,mayu,superhirn,srmcollider,openswath,msproteomicstools,tric,findmf,protter,tapir,perludum,swath2stats,published datasets,coming soon

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Aebersold lab web application server | openmrm.org Reviews

https://openmrm.org

Aebersold web application server. Find web services developed by the Aebersold lab below. Please find the main lab web page here. Discover crosslinks, xQuest webserver application. Software for the analysis of cross-linked peptides. Software for the quantification of cross-linked peptides. Prediction, Validation and Visualisation of Chemical Cross-Links. Protein Identification False Discovery Rates. Label-free quantification; Latin Square Data. Prediction of Interferences in SRM.

INTERNAL PAGES

openmrm.org

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Welcome to msproteomicstools’s documentation! — msproteomicstools 0.1 documentation

http://www.openmrm.org/msproteomicstools

Msproteomicstools 0.1 documentation. Welcome to msproteomicstools’s documentation! Is a Python library that can be used in LC-MS/MS based proteomics. It features a core library called. And several associated executable scripts that use the library as well as a GUI for visualizing chromatograms, specifically output from OpenSWATH. Contents of the library:. Contents of the GUI code:. OpenSWATH - GUI Models. OpenSWATH - GUI Views. Contents of the executables:. Msproteomicstools 0.1 documentation.

2

Mayu

http://www.openmrm.org/muellelu/web/LukasReiter/Mayu

Protein Identification False Discovery Rates. Mayu is a software package for the analysis of (large) mass spectrometry-based shotgun proteomics data sets. Mayu determines protein identification false discovery rates (protFDR), peptide identification false discovery rates (pepFDR) and peptide-spectrum match false discovery rates (mFDR) using a novel robust and fast strategy. Mayu is not a search engine and works with any* peptide-spectrum match discriminant score derived from a database search. Provides t...

3

xQuest

http://www.openmrm.org/orinner/public/htdocs/xquest/xquest_review.html

4

Latin Square Data to article Mueller, LN et al.

http://www.openmrm.org/muellelu/web/Latin_Square_Data.php

This page contains links to the Latin Sqaure data set from the manuscript ". A novel tool for high resolution LC-MS based peptide/protein profiling". The available data spans the raw as well as preprocessed LC-MS runs (e.g. detected MS1 features), collected MS2 peptide identifications processed on the TransProteomicsPipeline. TPP) and the constructed. Download files via this link. MS2 scans are collected during every LC-MS run and processed on the TPP. Download files via this link.

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Aebersold lab web application server

Aebersold web application server. Find web services developed by the Aebersold lab below. Please find the main lab web page here. Discover crosslinks, xQuest webserver application. Software for the analysis of cross-linked peptides. Software for the quantification of cross-linked peptides. Prediction, Validation and Visualisation of Chemical Cross-Links. Protein Identification False Discovery Rates. Label-free quantification; Latin Square Data. Prediction of Interferences in SRM.

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