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ORENZA

orenza : a database of oprhan enzymes activities

http://orenza.u-psud.fr/

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ORENZA | orenza.u-psud.fr Reviews
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orenza : a database of oprhan enzymes activities
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ORENZA | orenza.u-psud.fr Reviews

https://orenza.u-psud.fr

orenza : a database of oprhan enzymes activities

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1

ORENZA

http://www.orenza.u-psud.fr/query_orenza_by_class.php

A database of OR. EC used by the NC-IUBMB. List of ORENZA sorted by classes of activity. 1078 Enzymes activities are presently orphans. EC 1- .-. EC 2- .-. EC 3- .-. EC 4- .-. EC 5- .-. EC 6- .-.

2

ORENZA

http://www.orenza.u-psud.fr/about.php

A database of OR. EC used by the NC-IUBMB. Orphan enzyme activities correpond to the enzyme activities (EC numbers) defined by the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB), and which are not associated with any amino acid sequences in the major public databases (i.e. UniProt, Enzyme, PDB, IntEnz, KEGG, BRENDA). ORENZA is a relationnal database of ORphan ENZyme Activities and this web site allows you to easily browse and search ORENZA. If any, for ...

3

ORENZA

http://www.orenza.u-psud.fr/download.php

A database of OR. EC used by the NC-IUBMB. ORENZA 2 32.txt. List of ORphan ENZymes Activities sorted by EC number. Based on UniProt 2011.01. NC IUBMB 11 01 11.txt. List of EC numbers used by the NC-IUBMB sorted by EC number. ORENZA 2 31.txt. List of ORphan ENZymes Activities sorted by EC number. Based on UniProt 2010.11. NC IUBMB 02 11 10.txt. List of EC numbers used by the NC-IUBMB sorted by EC number. ORENZA 2 30.txt. List of ORphan ENZymes Activities sorted by EC number. Based on UniProt 2010.10.

4

ORENZA

http://www.orenza.u-psud.fr/query_in_use_by_class.php

A database of OR. EC used by the NC-IUBMB. EC numbers used by the NC IUBMB. 5384 EC numbers are presently used by the NC-IUBMB. Among them 1078 are orphans. EC 1- .-. EC 2- .-. EC 3- .-. EC 4- .-. EC 5- .-. EC 6- .-.

5

ORENZA

http://www.orenza.u-psud.fr/index.php

A database of OR. EC used by the NC-IUBMB. ORENZA provides an accurate and up to date list of Enzyme Activities for which no sequences are available in the main sequence protein databases. This is ORENZA version 2 42 of 16-Apr-2014. This version is based on data from BRENDA. Release 2014.04 (Swiss-Prot 2014.04 TrEMBL 2014.04).

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eBIO : Plate-forme de bioinformatique Université Paris Sud

http://ebio.u-psud.fr/eBIO_BDD.php

Base de données de génotypage pour différents microorganismes. I Grissa, P Bouchon, C Pourcel and G Vergnaud. On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing. Biochimie Volume 90, Issue 4, April 2008;660-668. Service Web pour la recherche sans effort des gènes procaryotes et de leur séquence. Web server for the effortless retrieval of prokaryotic gene context and sequence. Descorps-Declère S, Barba M, Labedan B. Matching curated genome databases: a non trivial task.

orphanenzymes.org orphanenzymes.org

FAQs - Orphan Enzyme Project

http://www.orphanenzymes.org/faqs

What’s an orphan? Background on orphan enzymes. What is an orphan enzyme? What’s the difference between an orphan and a species-specific orphan? How is it possible that these orphan enzymes weren’t sequenced already? Solving the orphan enzyme problem. How do I report a new orphan enzyme? How do I contribute information about existing orphan enzymes? What if we have a sample of an orphan enzyme and would like to contribute it for sequencing or testing? What is an orphan enzyme? Page for more information.

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http://lcsb.epfl.ch/page-52852-en.html

Jump to search field. Laboratory of Computational Systems Biotechnology. Tools for System Biology. KEGG: Kyoto Encyclopedia of Genes and Genomes. KEGG (Kyoto Encyclopedia of Genes and Genomes) is a bioinformatics resource for linking genomes to life and the environment. Encyclopedia of Escherichia coli K-12 Genes and Metabolism. Is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc. Project performs literature-based curation. Welcome to the ExPASy. Enzyme Database - BRENDA.

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ORENZA

A database of OR. EC used by the NC-IUBMB. ORENZA provides an accurate and up to date list of Enzyme Activities for which no sequences are available in the main sequence protein databases. This is ORENZA version 2 42 of 16-Apr-2014. This version is based on data from BRENDA. Release 2014.04 (Swiss-Prot 2014.04 TrEMBL 2014.04).

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