orygenesdb.cirad.fr
OryGenesDB BlastRice reverse genetics
http://orygenesdb.cirad.fr/
Rice reverse genetics
http://orygenesdb.cirad.fr/
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OryGenesDB Blast | orygenesdb.cirad.fr Reviews
https://orygenesdb.cirad.fr
Rice reverse genetics
OryGenesDB Data
http://orygenesdb.cirad.fr/data.html
Oryza sativa ssp. japonica. Oryza sativa ssp. indica. Oryza sativa ssp. japonica. 1 Unified Rice Pseudomolecules(Version 7.0, October 2011). The 12 rice pseudomolecule sequences are now common to both the MSU Rice Genome Annotation Project. And the Rice Annotation Project Database (RAP-DB)/International Rice Genome Sequencing Project. In release 7, there were 373,245,519 bp of non-overlapping rice genome sequence from the 12 rice chromosomes. The genes that had been identified from release 6.1 we...OryGe...
OryGenesDB Blast
http://orygenesdb.cirad.fr/blast.html
Oryza sativa ssp. japonica. Oryza sativa ssp. indica. Or upload a file. 1000 bp upstream genomic sequences (lower case) from the translational start codons (upper case). Gene sequences from MSU V7 release, including exons, introns and upstream/downstream untranslated regions. CDS sequences from MSU V7 release. Does not include intron sequences or UTRs.(ie Coding sequence only). Translated protein sequences from MSU V7 release. CDS sequences. Does not include intron sequences or UTRs. Or upload a file.
Oryza sativa ssp. japonica (version 7.0): 37 kbp from Os01:143,000..180,000
http://orygenesdb.cirad.fr/cgi-bin/gbrowse
Recenter on this region. Dump selected gene(s) as FASTA (Translated coding sequences). Dump selection as FASTA. Help with this browser. Show my user ID. Log in / create account. Oryza sativa ssp. japonica (version 7.0): 37 kbp from Os01:143,000.180,000. Download Decorated FASTA File. Oryza sativa ssp. indica. Oryza sativa ssp. japonica (version 6.1). Oryza sativa ssp. japonica (version 7.0). Protein Coding Gene Models MSU. Protein Coding Gene Models MSU. Show Active Tracks Only. A Gene Information (MSU).
OryGenesDB Blast
http://orygenesdb.cirad.fr/index.html
The aim of this Oryza sativa database was first to display sequence information resulting from the activities of our group, such as the T-DNA and Ds flanking sequence tags (FSTs) produced in the framework of the French genomics initiative Genoplante. And the EU consortium Cereal Gene Tags. Later, we decided to link this information with related molecular data from external rice molecular resources (cDNA full length, Gene, EST, Markers, Expression data.). Release 7 - Unified Rice Pseudomolecules. This eff...
OryGenesDB Tools
http://orygenesdb.cirad.fr/tools.html
Oryza sativa ssp. japonica. Oryza sativa ssp. indica. Gene sequences from MSU V7 release, including exons, introns and upstream/downstream untranslated regions. CDS sequences from MSU V7 release. Does not include intron sequences or UTRs.(ie Coding sequence only). Translated protein sequences from MSU V7 release. Example : Os01g10900.1. Paste your gene list. Or upload a file. Gene sequences from MSU V7 release, including exons, introns and upstream/downstream untranslated regions. Entry an Interpro domain.
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Links
http://bioinfo.mpl.ird.fr/index.php/links
You can register on cluster! Ask for portal account. Ask for cluster account. Tools and resources for plant genomics. Comparative genomics in green plants. Contains genomic, genetic, phenotypic and taxonomic information for Euasterid clade: Solanaceae (tomato, potato, eggplant, pepper, petunia) and Rubiaceae (coffee). Is a site about coffee genomics in Italy. Is an interactive tool for Rice reverse genetics. Is a resource for comparative grass genomics . Kyoto Encyclopedia of Genes and Genomes . Is a web...
ReNaBi » Databases
http://www.renabi.fr/category/databases
Archive for the Databases. Posted on décembre 26, 2009 by admin. ReNaBi’s platforms are providing many databases that represent key resources for the community. These databases cover a wide range of topics:. Plant and animal sequence databases. Protein and motif databases. Enzyme and pathway databases. Here is a listing of these databases. Database on giant viruses. European Hepatitis C Virus database. Database of Plasmodium falciparum gene function predictions based on postgenomic data. Relational datab...
Tropgene
http://tropgenedb.cirad.fr/tropgene/JSP/links.jsp
The banana (Musa acuminata) genome. Global Musa Genomics Consortium. Musa Germplasm Information System. The genome sequence of the Theobroma cacao. Belizian Criollo genotype (B97-61/B2). The New International Genetic Cocoa Database. Global Cacao Genetic Resources Network. Germplasm Resources Information Network, developed and maintained by USDA. The International Cocoa Germplasm Database. International Coffee Genome Network. Comparative Evolutionary genomics of cotton. Rice Genetic Resource in Japan.
Rice Genomics: June 2007
http://rice-genomics.blogspot.com/2007_06_01_archive.html
Scientists have a social responsibility to use science to help solve the important problems of humanity. Friday, June 22, 2007. SSR: the most powerful marker. Emerson Hall, Cornell University. SSR (microsatellite) is the most powerful marker because this marker is highly polymorphic, highly reproducible and codominant. Before the xa5 gene had been cloned, nobody thought that a gene encoding general transcription factor was involved in susceptibility to certain strain of bacterial blight. Neither some...
Links | REFUGE
http://www.refuge-platform.org/content/links
IRD rice genomics team. Génoplante Bioinformatic team. Genome annotation, markers and genetic stocks. MSU rice annotation project, USA. Rice Annotation Project Database , Japan. Rice Genome Project, Japan. NCBI Plant Plant Genomes Central at NCBI. BGI Rice Information (BGI) Indica (93-11) rice genome data. MOsDB MIPS Oryza sativa database. Rice Blast Magnaporthia grisea genomics. GRIN Plant genetic resources. IRIS International Rice Information System. TAIR The Arabidopsis Information Resource. Rice Micr...
Species | South Green
http://www.southgreen.fr/content/species
The double entry table below presents databases in row 1 and species in column 1. It allows users to find out for each species which databases have data and also for each database which species can be found. Also note that checked cells provide direct links to associated resources. C) South Green, 2013.
Documento sin título
http://www.anesesma.org/links.htm
Http:/ www.fungi.ensembl.org/index.html/. International Rice Blast Genome Consortium. Http:/ www.riceblast.org/. Gramene - Rice resources. Http:/ www.gramene.org/resources/#sequence. OrygenesDB - an interacting tool for Rice reverse genetics. Http:/ orygenesdb.cirad.fr/. Magnaporthe grisea Comparative Database. Http:/ www.broadinstitute.org/annotation/genome/magnaporthe comparative/MultiHome.html. Fungal Genetics Stock Center. Http:/ www.fgsc.net/. Phytopathogenic Fungi and Oomycete EST Database.
Oryza Tag Line
http://oryzatagline.cirad.fr/archive.htm
5,000 lines with phenotypic observations, recorded during their field evaluation at CIAT, Colombia, are now integrated. OryGenesDB 2008 update: database interoperability for functional genomics of rice. Droc G, Périn C, Fromentin S, Larmande P. Nucleic Acids Res. 2009 Jan;37(Database issue):D992-5. Epub 2008 Nov 26. September 12, 2008. May 2, 2008. Oryza Tag Line provides a trait ontology browser based on the well known Amigo browser. March 15, 2008. January 1, 2008. May 25, 2007. October 19, 2006. Centr...
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Orygen Home - Orygen, The National Centre of Excellence in Youth Mental Health
Services Development and Consulting. Workforce Strategy and Training. Youth Participation and Engagement. Childhood trauma link offers treatment hope for people with schizophrenia. Government extends its support of Orygen’s mental health leadership. Guidelines needed for use of therapy animals in mental health treatment. How can parents support young people to safely navigate social media? Orygen's 2017 Annual Report Out Now. Computerised speech analysis successfully predicts psychosis in at-risk patients.
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orygenes.org
Orygenes+ | Portal o Biblii
Dzieje Apostolskie i listy św. Pawła. Ewangelia i listy św. Jana, Apokalipsa. Dzieje Apostolskie i listy św. Pawła. Ewangelia i listy św. Jana, Apokalipsa. Ja jestem chlebem / Torą życia. Wzięliśmy i jedliśmy Chleb Błogosławiony. Ciało Pana i Krew drogocenną. Chleb przemienił Pan, Kielich zbawczy, Napój orzeźwiający. Tekst Ewangelii Ewangelia według św. Jana (J 6,41-51) 41 Ἐγόγγυζον οὖν οἱ. Film „Bramy Jerozolimy” on-line. Wiara i nauka. Świadectwo biblistów. NEWSY ZE ŚWIATA BIBLISTÓW. New Book: Early Ch...
OryGenesDB Blast
The aim of this Oryza sativa database was first to display sequence information resulting from the activities of our group, such as the T-DNA and Ds flanking sequence tags (FSTs) produced in the framework of the French genomics initiative Genoplante. And the EU consortium Cereal Gene Tags. Later, we decided to link this information with related molecular data from external rice molecular resources (cDNA full length, Gene, EST, Markers, Expression data.). Release 7 - Unified Rice Pseudomolecules. This eff...
Orygenes+
Newsy ze świata biblistów. Przyjaciele Boga o Biblii. Bibliografia biblistyki przygotowana na podstawie projektu Google Search Books. Jest to próba zebrania i usystematyzowania zasobów internetowych dostępnych on-line. Znajdziesz tu książki i artykuły udostępnione w projekcie Google Search Books, a także w innych projektach typu Open Scourse. W chwili obecnej nasza bibliografia zawieka ok. 8000 pozycji dostępnych on-line. Newsy ze świata biblistów. Omówienia nowości wydawniczych z zakresu biblistyki.
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Orygens
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