pacomplex.life.nctu.edu.tw

PAComplex

PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

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PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

<META> KEYWORDS

1 bioxgem

2 pacomplex

3 example 1

4 example 2

5 peptide set

6 protein sequence

7 enter fasta sequence

8 enter peptide sequence s

9 example 3

10 hla e

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bioxgem,pacomplex,example 1,example 2,peptide set,protein sequence,enter fasta sequence,enter peptide sequence s,example 3,hla e,peptide length,multi templates,joint z,value threshold,reference to cite,nucleic acids research,related references

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PAComplex | pacomplex.life.nctu.edu.tw Reviews

https://pacomplex.life.nctu.edu.tw

PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

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pacomplex.life.nctu.edu.tw

1

PAComplex

http://pacomplex.life.nctu.edu.tw/result.php?type=SEQ&JOBID=example_02

Peptide Antigens and TCR-pMHC Complex. Summary of query peptides. Summary of query protein:. Sp Q50306 RL5 MYCPN. 1 peptide ( Z. Value cutoff : 4.

2

PAComplex: Document

http://pacomplex.life.nctu.edu.tw/help.php

What can PAcomplex do for you? Value of each peptide candidate. On the other hand, most of the current peptide-antigen prediction web servers only provide ranks and scores of the query protein sequence or peptides except the MODPROPEP server (Table 1). Table 1. Comparing PAComplex with four web servers for MHC-peptide interactions. Protein sequence / Peptide sets. Protein sequence / Swiss-Prot AC/ID / RefSeq ID. Protein sequence / Peptide sets. Template-based model and Homologous search. Sp P03155 DPOL H...

3

PAComplex

http://pacomplex.life.nctu.edu.tw/index.php

PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

4

PAComplex

http://pacomplex.life.nctu.edu.tw/index.php?tag=ex1

PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

5

PAComplex

http://pacomplex.life.nctu.edu.tw/result.php?type=SEQ&JOBID=example_01

Peptide Antigens and TCR-pMHC Complex. Summary of query peptides. Summary of query protein:. Sp P03155 DPOL HBVD1. 3 peptides ( Z. Value cutoff : 4.

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pacomplex.life.nctu.edu.tw

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PAComplex: Infer Peptide Antigen Family and TCR-pMHC Binding Model. PAComplex is a web server investigating and visualizing both TCR-peptide / peptide-MHC interfaces. Furthermore, it provides biological insights of TCR-pMHC binding models. Choose a format of peptide to run:. Input a sequence of protein. Input one or a set of peptides. Sp P03155 DPOL HBVD1 Protein P (Fragment) OS=Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) GN=P PE=1 SV=1 MPLSYQRFRRLLLLDDEAGPLEEELPRLADEDLNRR...

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