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  1. Keywords hit in search results
    affinity augmented autodock autodock4 autodocktools4 automated binding bindingmoad biomolecular bound codes collection combination compact comparison complexes comprehensive containing created current database databases deposited designed developed directionality docking ehits encyclopedia error every example experimentally extended features filtered fusion graph graphs groupat improved intervals irreducible ligand lipinski measured michigan mother pairwis pattern pdbbind protease protein provide quality release scripps selected selective shaomeng simbiosys standard subset taken these tutorial types university using validation version welcome where wikipedia
  2. Search Engine Recommended Keywords
    What Is PDB, PDB Data Bank, PDB Org Explore, ISC BIND, BIND 9, Definition Bind, DNS Binding, ISC DNS,
PDBbind
http://pdbbind.org/
PDBBind Database - University of Michigan
The PDBbind database is developed in Dr. Shaomeng Wang's groupat the University of Michigan. The PDBbind database is designed to provide a collection of ...
http://sw16.im.med.umich.edu/databases/pdbbind/index.jsp
Welcome to PDBbind-CN Database
The aim of the PDBbind database is to provide a comprehensive collection of the experimentally measured binding affinity data for all types of biomolecular complexes ...
http://pdbbind.org.cn/
BindingMoad.org - The Mother Of All Databases
The current release is the 2010 version. What is Binding MOAD? We have created a subset of the Protein Data Bank (PDB), containing every high-quality example of ...
http://bindingmoad.org/
Pattern in Graphs
PDB. BIND. DIP. Irreducible Intervals. Pairwis Graph Comparison. Gene Fusion. PDB. BIND. DIP. irreducible intervals. irreducible intervals. Gene Fusion. PDB. BIND. DIP. irreducible intervals
http://cs.nyu.edu/parida/DIMACSworkshopJune20-2205/DIMACSworkshop/slides/SteffenHeber.ppt
PDBbind database - Wikipedia, the free encyclopedia
The PDBbind database is a comprehensive collection of experimentally measured binding affinity data (Kd, Ki, and IC50) for the protein-ligand complexes deposited in ...
http://en.wikipedia.org/wiki/PDBbind_database
SimBioSys Inc. > eHiTS > New Features
These codes were selected as a combination of the GOLD validation set, the PDB-bind 2004 set and augmented with some more codes from the PDB, filtered with the ...
http://www.simbiosys.ca/ehits/ehits_newfeatures.html
SimBioSys Inc. > eHiTS > Validation
These codes were selected as a combination of the GOLD validation set, the PDB-bind 2004 set, augmented with some more codes from the PDB, filtered with the Lipinski's ...
http://www.simbiosys.ca/ehits/ehits_validation.html
Using AutoDock 4 with ADT: A Tutorial
PDB-Bind Standard error (in Kcal/mol): 2.62 (extended) 2.72 (compact) 2.52 (bound) 2.63 (AutoDock 3, bound) Improved H-bond directionality
http://autodock.scripps.edu/faqs-help/tutorial/using-autodock-4-with-autodocktools/UsingAutoDock4WithADT.ppt.Handouts3pp.v3.pdf
AutoDock4 and AutoDockTools4: Automated Docking with Selective ...
... were taken from the Ligand-Protein Database (http://lpdb.scripps.edu) and a set of 87 HIV protease complexes where taken from the PDBBind database (http://www.pdbbind.org).
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2760638/
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