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Plant Genome and Systems Biology (PGSB)

Plant Genome and Systems Biology. Plant Genome and Systems Biology. The PGSB plant genomics group focuses on the analysis of plant genomes, using bioinformatic techniques. To store and manage the data, we developed a database, PlantsDB. That aims to provide a data and information resource for individual plant species. In addition PlantsDB. Provides a platform for integrative and comparative plant genome research. We are pleased to announce the 4th transPLANT user Training Workshop. On Apr. 04, 2013.

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Plant Genome and Systems Biology (PGSB) | pgsb.helmholtz-muenchen.de Reviews
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Plant Genome and Systems Biology. Plant Genome and Systems Biology. The PGSB plant genomics group focuses on the analysis of plant genomes, using bioinformatic techniques. To store and manage the data, we developed a database, PlantsDB. That aims to provide a data and information resource for individual plant species. In addition PlantsDB. Provides a platform for integrative and comparative plant genome research. We are pleased to announce the 4th transPLANT user Training Workshop. On Apr. 04, 2013.
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Plant Genome and Systems Biology (PGSB) | pgsb.helmholtz-muenchen.de Reviews

https://pgsb.helmholtz-muenchen.de

Plant Genome and Systems Biology. Plant Genome and Systems Biology. The PGSB plant genomics group focuses on the analysis of plant genomes, using bioinformatic techniques. To store and manage the data, we developed a database, PlantsDB. That aims to provide a data and information resource for individual plant species. In addition PlantsDB. Provides a platform for integrative and comparative plant genome research. We are pleased to announce the 4th transPLANT user Training Workshop. On Apr. 04, 2013.

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pgsb.helmholtz-muenchen.de pgsb.helmholtz-muenchen.de
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Plant Genome and Systems Biology (PGSB) - CrowsNest

http://pgsb.helmholtz-muenchen.de/plant/crowsNest/index.jsp

Plant Genome and Systems Biology. With the increasing number of sequenced and partially sequenced plant genomes there is a growing need for genome comparison in order to elucidate the functions of genes and to study the evolutionary history. CrowsNest is a Comparative Map Viewer at PGSB. That uses a dynamic graphical interface to visualize and investigate genome-wide chromsome organization. As well as genome-wide synteny. Between two or more plant genomes. CrowsNest is part of the transPLANT project.

2

Plant Genome and Systems Biology (PGSB)

http://pgsb.helmholtz-muenchen.de/plant/triticeae/index.jsp

Plant Genome and Systems Biology. Welcome to the PGSB Triticeae genomes database. TriticeaeGenome project (Genomics for Triticeae improvement) is designed to achieve significant progresses in Triticeae genomics and support efficient breeding of improved varieties for the European agriculture. This European project was launched on 1st June 2008, for a duration of 4 years, and mobilises 14 European research institutes and 2 industrial partners, from 9 different countries. Please also visit GnpMap. A simila...

3

Plant Genome and Systems Biology (PGSB) - PlantsDB

http://pgsb.helmholtz-muenchen.de/plant/plantsdb.jsp

Plant Genome and Systems Biology. Plant genomics group focuses on the analysis of plant genomes, using bioinformatic techniques. To store and manage the data, we developed a database, PlantsDB, that aims to provide a data and information resource for individual plant species. In addition PlantsDB provides a platform for integrative and comparative plant genome research. Medicago truncatula (barrel medic). Arabidopsis thaliana (thale cress). Phoenix dactylifera (date palm). An article about "Analysing com...

4

Plant Genome and Systems Biology (PGSB) - Publications

http://pgsb.helmholtz-muenchen.de/plant/publications.jsp

Plant Genome and Systems Biology. Unterholzner SJ, Rozhon W, Papacek M, Ciomas J, Lange T, Kugler KG, Mayer KF, Sieberer T, Poppenberger B. Brassinosteroids Are Master Regulators of Gibberellin Biosynthesis in Arabidopsis. 2015 Aug, PMID 26243314. DOI 10.1105/tpc.15.00433. Haberer G, Mayer KF. Barley: From Brittle to Stable Harvest. 2015 Jul, 162(3):469-71 PMID 26232216. DOI 10.1016/j.cell.2015.07.023. The Genetic Basis of Composite Spike Form in Barley and "Miracle-Wheat". 2015 Jul, PMID 26156223. Helgu...

5

Plant Genome and Systems Biology (PGSB) - RNASeqExpressionBrowser

http://pgsb.helmholtz-muenchen.de/plant/RNASeqExpressionBrowser/index.jsp

Plant Genome and Systems Biology. High-throughput Expression Data Analysis. In the latest version we also allow searches for differentially expressed genes and co -expressed genes (Current version). The showcase of the original publication can be accessed here (old showcase). Please consult the ReadMe.pdf in the source code package for installation details. We also have created a screencast showing the installation process. The tool is open source (LGPL license) and is available for download. Major new f...

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LAILAPS - Instance list

http://lailaps.ipk-gatersleben.de/products/running_instance.html

How to use LAILAPS. Imprint / Data Protection Policy. With the installation program, LAILAPS can index and link customized databases and run as different instance. Trans-national infrastructure for plant genomic science, EU. TransPLANT is a European-Union funded e-infrstructure to support computational analysis of genomic data from crop and model plants. Search indexes major gene and protein databases, ontologies. Http:/ webapps.ipk-gatersleben.de/lailaps/app. Barcelona Supercomputing Center (BSC), Spain.

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Plant Genome and Systems Biology (PGSB)

Plant Genome and Systems Biology. Plant Genome and Systems Biology. The PGSB plant genomics group focuses on the analysis of plant genomes, using bioinformatic techniques. To store and manage the data, we developed a database, PlantsDB. That aims to provide a data and information resource for individual plant species. In addition PlantsDB. Provides a platform for integrative and comparative plant genome research. We are pleased to announce the 4th transPLANT user Training Workshop. On Apr. 04, 2013.

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