phylogenomics.blogspot.com
The Tree of LifeA blog about microbiology, genomics and metagenomics, sequencing, evolution, ecology, and open science.
http://phylogenomics.blogspot.com/
A blog about microbiology, genomics and metagenomics, sequencing, evolution, ecology, and open science.
http://phylogenomics.blogspot.com/
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The Tree of Life | phylogenomics.blogspot.com Reviews
https://phylogenomics.blogspot.com
A blog about microbiology, genomics and metagenomics, sequencing, evolution, ecology, and open science.
phylogenomics.blogspot.com
The Tree of Life: #badomics words
https://phylogenomics.blogspot.com/p/my-writings-on-badomics-words.html
The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. I am a bit obsessed with the use of "omics" in science and in particular the adding of this suffix onto everything and anything. Here are some writings / stories on the topic. Worst New Omics Word Award. Badomics words and the power and peril of the ome-meme. Richard Grant in the Guardian: Say "Ome": scientists get silly The proliferation of various "–omes" betrays a deep-seated love of the irreverent. Badomics word of the year already?
The Tree of Life: Twisted tree of life award #15: NBC News on "Junk DNA mystery"
https://phylogenomics.blogspot.com/2013/05/twisted-tree-of-life-award-15-nbc-news.html
The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. Monday, May 13, 2013. Twisted tree of life award #15: NBC News on "Junk DNA mystery". Oh for fu$*# sake. Really MSNBC? I mean, I know perhaps I should not expect much from some in the press but this is just awful: 'Junk' DNA mystery solved: It's not needed. Brought to us by NBC News and LiveScience (which actually can have some pretty good science coverage). This article has some complete and utter crap:. Nobody's really known what jun...
The Tree of Life: Some more pics/vids of the crowd at #OccupyUCDavis today
https://phylogenomics.blogspot.com/2011/11/see-full-gallery-on-posterous-img9653.html
The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. Monday, November 21, 2011. Some more pics/vids of the crowd at #OccupyUCDavis today. See the full gallery on Posterous. Subscribe to: Post Comments (Atom). Amazon Tree of Life Store. My brothers dream come true: baseball meets bioinf. Letter of support for #UCDavis Chancellor cosigned. Journal club today on bacteria in toilets - postin. Town Hall #2 - Chancellor Katehi meets w/ Faculty/. Whats Hot in Biology 2011? Why, the Genomic Encyc.
The Tree of Life: Why I am ashamed to have a paper in Science
https://phylogenomics.blogspot.com/2007/02/why-i-am-ashamed-to-have-paper-in.html
The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. Wednesday, February 21, 2007. Why I am ashamed to have a paper in Science. So I just had a paper published in Science last week. In many ways, it has all the makings of one of those papers I should be really proud of. First, it represents a collaboration with my undergraduate advisor, Colleen Cavanaugh. And one of my main areas of research is on the evolution of the genomes of symbionts. And, the genome was sequenced. Below I have embe...
The Tree of Life
https://phylogenomics.blogspot.com/index.html
The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. Friday, July 22, 2016. Today's misleading overselling the #microbiome - U. Chicago on Alzheimer's and gut microbes. Well, this is disappointing if not disturbing. A new paper is out that has some interesting findings but the paper itself, and the press release form the authors (at University of Chicago) really goes overboard in misstating the findings. Here is the paper in Scientific Report. But what they do not report on is any eviden...
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TreeTapper-Dev: TreeTapper down Dec. 26-28
http://treetapper-dev.blogspot.com/2011/11/treetapper-down-dec-26-28.html
A blog describing the development of the TreeTapper.org website. Monday, November 28, 2011. TreeTapper down Dec. 26-28. TreeTapper will be down Dec. 26-28, 2011, due to the upgrade process to UTK's infrastructure. Subscribe to: Post Comments (Atom). The Tree of Life. A mini rant about diversity at meetings #STEMDiversity #YAMMM #manel. GRBio: A Call for Community Curation - what community? Why is English - and biology - so Complicated? Basics of Adaptive Promoting. Knoxville, TN, United States.
TreeTapper-Dev: Visualizing trees
http://treetapper-dev.blogspot.com/2008/10/visualizing-trees.html
A blog describing the development of the TreeTapper.org website. Tuesday, October 14, 2008. We recently had a community summit at NESCent on directions for the future. As part of the biodiversity and phylogenetics breakout group (see notes here. One thing that came up was a need for better ways of visualizing trees [one good idea was inviting Ben Fry. To NESCent to work on this]. Rod Page. But why, with so many programs, do people feel that so much more work is needed? November 7, 2008 at 12:40 AM. Basic...
TreeTapper-Dev: TreeTapper code now available
http://treetapper-dev.blogspot.com/2009/07/treetapper-code-now-available.html
A blog describing the development of the TreeTapper.org website. Thursday, July 30, 2009. TreeTapper code now available. The code for TreeTapper (the website's mostly PHP code) is now available. I'll be continuing to modify it, but please feel free to look it over and suggest (or submit) corrections, esp. regarding security. Subscribe to: Post Comments (Atom). The Tree of Life. A mini rant about diversity at meetings #STEMDiversity #YAMMM #manel. GRBio: A Call for Community Curation - what community?
scienceandevolution.blogspot.com
Science and Evolution: July 2008
http://scienceandevolution.blogspot.com/2008_07_01_archive.html
Discussions about Science, Evolution, and the Nature of the Universe. Tuesday, July 22, 2008. New Method Of Selecting DNA Microarray-based Genomic Selection (MGS),. Finding: Microarray-based Genomic Selection (MGS), is a research protocol that allows scientists to extract and enrich specific large-sized DNA regions, then compare genetic variation among individuals using DNA resequencing methods. Sequencing can be done by a small staff of researchers.it is inexpensive and not labor intensive. MGS uses DNA...
scienceandevolution.blogspot.com
Science and Evolution: The Successful Failure of Creationism
http://scienceandevolution.blogspot.com/2013/10/the-successful-failure-of-creationism.html
Discussions about Science, Evolution, and the Nature of the Universe. Saturday, October 19, 2013. The Successful Failure of Creationism. Creationism and its new enhanced version, Intelligent design, have succeeded in failing. They have done so by showing that their structure of understanding how things are created can only come about by science, which they deny occurs or exists. They believe that the world is flat and covered by a firmament or dome. They take the literal interpretation of the bible&#...
A Separate Peace - where doctors find meaning — Infectious Ideas
http://infectious-ideas.org/infectiousideas/2014/2/10/a-separate-peace-where-doctors-find-meaning
A Separate Peace - where doctors find meaning. This essay originally appeared in The Magazine. Shivering in the brisk October air, I stood clutching a small pudding cup, licking the plastic spoon. Standing no,. At the time, I was a second-year resident in pediatrics at Mount Sinai Kravis Children’s Hospital. One of my co-residents (I’ll never remember exactly who it was). I was led up to the roof. The roof deck on Mount Sinai’s children’s hospital is usually used as a public space for residen...My first ...
scienceandevolution.blogspot.com
Science and Evolution: June 2008
http://scienceandevolution.blogspot.com/2008_06_01_archive.html
Discussions about Science, Evolution, and the Nature of the Universe. Friday, June 20, 2008. Importance Of Gene Regulation For Common Human Disease. Finding: A new study shows that common, complex diseases are more likely to be due to genetic variation in regions that control activity of genes, rather than in the regions that specify the protein code. Where are the regions? DNA sequence changes in. The challenge of large-scale studies that link a DNA variant to a disease. What the HapMap does. Past studi...
Tomorrow's Table: The organic approach is as old as dirt
http://pamelaronald.blogspot.com/2008/11/organic-approach-is-as-old-as-dirt.html
On this web log I explore topics related to genetics, food and farming. Wednesday, November 19, 2008. The organic approach is as old as dirt. Why give these advocates for GE a chance to state their case in the pages of OG? Because a scientific approach demands a reasoned, informed debate, not dogmatic rejection. Because if our organic principles are sound, they can hold up to debate. You dont stand up for centuries if you don't have sturdy legs.". Subscribe to: Post Comments (Atom). Michael Pollan, autho...
Tomorrow's Table: January 2009
http://pamelaronald.blogspot.com/2009_01_01_archive.html
On this web log I explore topics related to genetics, food and farming. Monday, January 19, 2009. To Label or not to Label. If GE crops are considered safe by most scientists, why not simply label the produce from these crops and let people decide for themselves? Most people like to know what they are eating and make their own choices. Neither statement says anything informative about the state of our food nor the creation of our universe. With no specific hazards associated with GE foods. It seems to me ...
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Main Page - Phylogenome
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Main Page - Phylogenome.net
Welcome to openfree BiO network. BiO network is on-line information source for all the areas of biological research, technology, training, and business. Anyone is welcome to contribute to and use the content with maximum freedom. Please visit our sites that are listed in [1]. Some of our sites are:. Welcome to openfree BiO network. BiO network is on-line information source for all the areas of biological research, technology, training, and business. Please visit our sites that are listed in [1].
PhyloFacts
Joan Nelson Warnow Blewett (1931-2006). Kimmen Sjölander's Personal Home Page. Selected Grooks, by Piet Hein. Selected poems by Pablo Neruda. Selected poems by the Chinese poet Li Po. Selected poems by the Chinese poet Tu Fu (712-770). Some of my favorite poets. Phylogenomics tools and data for the scientific community. Research software available for download. PhyloFacts alignments, trees, and HMMs. Berkeley Phylogenomics Group publications. Members of Berkeley Phylogenomics Group.
The Tree of Life
The Tree of Life. Blog of Jonathan A. Eisen, Professor at U.C. Davis. Microbiomania and Overselling the Microbiome. Story Behind the Paper. Freeing My Fathers Publications. Monday, March 26, 2018. Retraction of paper on "Gut Makeover Diet" and the microbiome retracted for fundamental flaws including that it did not in any way look at the microbiome #overselling #hype #microbiomania. Gut Makeover" paper retracted for fundamental flaws #microbiome. March 26, 2018. Monday, March 19, 2018. S Working Life sec...
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