rob.beagrie.com
Rob Beagrie / Molecular Biologist / Python ProgrammerTimeline Style CV / Resume / vCard Bootstrap Template.
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Rob Beagrie / Molecular Biologist / Python Programmer | rob.beagrie.com Reviews
https://rob.beagrie.com
Timeline Style CV / Resume / vCard Bootstrap Template.
Rob Beagrie's Blog
Enhancer Journal Club: Enhancer runaway and the evolution of diploid gene expression. I came across this very interesting theoretical paper about enhancer evolution a couple of months ago. And thought it was worth a little discussion. The paper comes from Frederic Fyon and others at the CNRS in Montpellier. The original paper can be found at PLOS Genetics, and it's well worth a read. Stronger enhancer homozygote (d). And enhancer locus heterozygotes (b). Or with the viable gene allele (c). Fyon, F. e...
rob.beagrie.com
Resume
http://rob.beagrie.com/cv
Blog: blog.rob.beagrie.com. I'm a Postdoctoral researcher working in Ana Pombo's lab at the MDC in Berlin (pombolab.wordpress.com). I work on both wet-lab and bioinformatics projects, with a major interest in cis-regulatory elements in mammalian genomes. I'm especially fascinated by the regulation of gene expression by 3D chromatin folding, and the mechanisms of enhancer action. Berlin Institute for Medical Systems Biology. MRC Funded PhD Studentship. MRC Clinical Sciences Centre. 1 week placement in the...
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FOS - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/fos.html
Wed 01 October 2014. Enhancer Journal Club: Genome-wide identification and characterization of functional neuronal activity dependent enhancers. I noticed a nice paper this week in Nature Neuroscience from Michael Greenberg's lab at Harvard Medical School. The paper discusses the identification of enhancers in neurons which are activated (or deactivated) when those neurons are stimulated by membrane de-polarization. The original paper can be found at: http:/ www.nature. Page 1 / 1.
Neurons - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/neurons.html
Wed 01 October 2014. Enhancer Journal Club: Genome-wide identification and characterization of functional neuronal activity dependent enhancers. I noticed a nice paper this week in Nature Neuroscience from Michael Greenberg's lab at Harvard Medical School. The paper discusses the identification of enhancers in neurons which are activated (or deactivated) when those neurons are stimulated by membrane de-polarization. The original paper can be found at: http:/ www.nature. Page 1 / 1.
Enhancer Journal Club: Genome-wide identification and characterization of functional neuronal activity–dependent enhancers - Rob Beagrie's Blog
https://blog.rob.beagrie.com/2014/10/01/enhancer-journal-club-genome-wide-characterization-of-neuronal-activity-dependent-enhancers
Enhancer Journal Club: Genome-wide identification and characterization of functional neuronal activity dependent enhancers. Wed 01 October 2014. The abstract is as follows:. Depolarization. In contrast, no putative enhancers with constant or decreased H3K27Ac after KCl treatment showed higher activity in the luciferase assay following the same treatment. Rob Beagrie - Proudly powered by pelican. Theme inspired by pelican-sober.
GFI1 - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/gfi1.html
Wed 07 October 2015. Enhancer Journal Club: Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma. I read a neat little paper in Nature just before Christmas about enhancer hijacking, which I think is a particularly interesting topic. The original paper can be found at: http:/ www.nature.com/nature/journal/v511/n7510/full/nature13379.html. The abstract is as follows:. Medulloblastoma is a highly malignant. Page 1 / 1. Rob Beagrie - Proudly powered by pelican.
Enhancers - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/enhancers.html
Tue 28 February 2017. Enhancer Journal Club: Enhancers and super-enhancers have an equivalent regulatory role in embryonic stem cells through regulation of single or multiple genes. I've been thinking a lot about super-enhancers recently and I found this paper. From Jennifer Mitchell's lab very interesting, especially as whether and how super-enhancers are distinct from "normal" enhancers has been generating a lot of discussion in the enhancer/gene-regulation literature recently. Sun 28 February 2016.
Enhancer Journal Club: Functional annotation of native enhancers with a Cas9-histone demethylase fusion - Rob Beagrie's Blog
http://blog.rob.beagrie.com/2015/11/05/enhancer-journal-club-functional-annotation-of-native-enhancers
Enhancer Journal Club: Functional annotation of native enhancers with a Cas9-histone demethylase fusion. Thu 05 November 2015. I really enjoyed Eric Mendenhall's 2013 paper in Nature Biotechnology. Where he was able to target LSD1 histone demethylase activity to endogenous enhancers using TALE fusion proteins (read my thoughts on that paper here. So I was very interested to see a similar approach published earlier this year in Nature Methods. Luciferase activity either of the ODE or of enhancer 1 (Enh1)&...
Enhancer Journal Club: Enhancer runaway and the evolution of diploid gene expression - Rob Beagrie's Blog
http://blog.rob.beagrie.com/2016/02/28/enhancer-journal-club-enhancer-runaway-and-gene-expression-evolution
Enhancer Journal Club: Enhancer runaway and the evolution of diploid gene expression. Sun 28 February 2016. I came across this very interesting theoretical paper about enhancer evolution a couple of months ago. And thought it was worth a little discussion. The paper comes from Frederic Fyon and others at the CNRS in Montpellier. The original paper can be found at PLOS Genetics, and it's well worth a read. Stronger enhancer homozygote (d). And enhancer locus heterozygotes (b). Fyon, F. et al., Enh...Akali...
evolution - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/evolution.html
Sun 28 February 2016. Enhancer Journal Club: Enhancer runaway and the evolution of diploid gene expression. I came across this very interesting theoretical paper about enhancer evolution a couple of months ago. And thought it was worth a little discussion. The paper comes from Frederic Fyon and others at the CNRS in Montpellier. The original paper can be found at PLOS Genetics, and it's well. Page 1 / 1. Rob Beagrie - Proudly powered by pelican. Theme inspired by pelican-sober.
gene expression - Rob Beagrie's Blog
https://blog.rob.beagrie.com/tag/gene-expression.html
Post tagged: gene expression. Sun 28 February 2016. Enhancer Journal Club: Enhancer runaway and the evolution of diploid gene expression. I came across this very interesting theoretical paper about enhancer evolution a couple of months ago. And thought it was worth a little discussion. The paper comes from Frederic Fyon and others at the CNRS in Montpellier. The original paper can be found at PLOS Genetics, and it's well. Thu 05 November 2015. Mon 25 November 2013. Thu 31 October 2013. Moving away from e...
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Welcome to my writing site here at The Authors Haunt. Though you may find some of my stories and poems on other sites, this is the only place on the Net where you will find all. So, I hope you enjoy my stories and poems, but either way please let me know, either by dropping me an email or by posting a comment in my forum. Stories, Poetry and Content 2011 Rob Hawes. Site Layout and Graphics 2011 Rob Hawes.
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Rob Beagrie / Molecular Biologist / Python Programmer
I'm a molecular biologist and python progammer in London. I'm also a keen programmer, especially in python. I've contributed to a number of open source projects, including doit. I'm currently writing a genome browser in python called EIYBrowse. Extend It Yourself Browser). I've found programming an invaluable skill during my research and I like to spread the knowledge around, so I contribute to and teach for Software Carpentry. And love to cycle. Here's some other stuff I've been enjoying recently:.
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Search Engine Optimization Expert. Search Optimization Audit Example. Consulting & Audits. Looking for a " Search Engine Optimization Expert. Or maybe you just did.). For the past 5 years I have ranked #1 in Google for this ultra competitive term. Are the results I achieved for clients:. My approach to SEO. Enter your contact details in the form on the right to access my 2015 SEO Guide. Ultimate 2015 SEO Guide. Looking for more organic traffic? View my SEO Services. August 3, 2015. July 13, 2015. Decided...
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